DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)72Ab and dnj-29

DIOPT Version :9

Sequence 1:NP_648818.3 Gene:l(3)72Ab / 39737 FlyBaseID:FBgn0263599 Length:2142 Species:Drosophila melanogaster
Sequence 2:NP_001369819.1 Gene:dnj-29 / 173278 WormBaseID:WBGene00001047 Length:752 Species:Caenorhabditis elegans


Alignment Length:525 Identity:94/525 - (17%)
Similarity:181/525 - (34%) Gaps:215/525 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1807 MDTLPLNLGM-------IAA-----------YYYINYTTIELFSLSLNSKTKVRGLLEIISSAAE 1853
            |..||:::||       .:|           ||:||.|          .:.::..::.::|.:.|
 Worm   204 MIILPVSVGMWWYSSIKYSADKVLLDTTRMYYYFINRT----------PRMEIGRMIAVLSGSFE 258

  Fly  1854 Y-----EDVVVRHHEEQVLRTLSQRLPNKLTGPNETAPK--FNDPH-IKTNLLLQAHLSRLQLGP 1910
            :     :::..|..::..:    .||..::.|.|:...:  .:.|: :|:.:||.|:||||.|..
 Worm   259 FSKQYNKEIQERETDDYEV----PRLMKQIAGVNDKGKEQPLSQPYALKSRVLLHAYLSRLPLES 319

  Fly  1911 E---LQGDTEQILSKAIRLIQACV----DVLSSNGWLSPAVAA----MELAQMVTQAMWSKDSYL 1964
            :   |:.|...|:::.:|.::..|    ::::.:.....::..    ::|..|..||:|.|:|.|
 Worm   320 QNDALEEDQSYIITRILRFVEEMVNCSQNLMNYSQHTKISIETFDNLLKLQPMFVQALWQKNSPL 384

  Fly  1965 KQLPHFSPEIVKRCTEKKIETVFDIMELEDEDRTRLLQ-LSDLQMADVARFCNRYPNIELNYEVV 2028
            .||||.:...::...:|::.:..|:..::.|.|..:|: ||:.:..||....:..|.:::..:.|
 Worm   385 LQLPHITDYNLQHLRKKRVFSCHDLAVMDAETRRSVLRSLSNEEYRDVMVVLSMMPRLQIETKTV 449

  Fly  2029 -----DKDRINSGSTVNVVVQLER----------------------------------------- 2047
                 ||..:.:|..|.:.|.:.|                                         
 Worm   450 VEGEDDKHELTAGCVVTLKVTMRRSRLIDPQEAGLADQYKKYAEDGGDDELEASEAPEEAAATVE 514

  Fly  2048 ----------------------------------------------------------------- 2047
                                                                             
 Worm   515 EEEVKKRKPWEKNKPKQKKKKAQGQGQKKFVKKNAPASPDTEKALKEEAKEEDDDDEKNSKASDS 579

  Fly  2048 EDEVTG---------------------------------------------PVIAPFFPQKREEG 2067
            |||.:|                                             .|.|||||.::.|.
 Worm   580 EDEESGASDSEKDGAAAAGGDQKDDQTDSEWEDDVANSKKSIFETKNTQTHTVHAPFFPTEKFEW 644

  Fly  2068 WWVVIG----DPKTNSLLSIKRL--TLQQKAKVKLDFVA-PSPGKHDYTLYYMSDSYLGCDQEYK 2125
            ||:.:.    ..|:..||:..:|  ||..:..:.:.|.| |..|.:.|.|...||||:..:....
 Worm   645 WWITVAYVDKKEKSRQLLTFPQLVKTLIDEQTIDIRFAAPPHKGIYTYNLSVKSDSYMDAEYSVD 709

  Fly  2126 FSIEV 2130
            |.|:|
 Worm   710 FKIDV 714

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)72AbNP_648818.3 BRR2 466..1241 CDD:224125
DEAD 482..661 CDD:278688
HELICc 773..859 CDD:197757
Sec63 982..1285 CDD:280962
DEXDc 1320..1506 CDD:214692
DEAD 1329..1495 CDD:278688
HELICc 1615..1694 CDD:197757
Sec63 1811..2127 CDD:280962 89/516 (17%)
dnj-29NP_001369819.1 DnaJ 107..165 CDD:395170
SEC63 212..713 CDD:214744 89/514 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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