DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Brr2 and ascc3

DIOPT Version :10

Sequence 1:NP_648818.3 Gene:Brr2 / 39737 FlyBaseID:FBgn0263599 Length:2142 Species:Drosophila melanogaster
Sequence 2:XP_073781783.1 Gene:ascc3 / 100332599 ZFINID:ZDB-GENE-130214-2 Length:2203 Species:Danio rerio


Alignment Length:2224 Identity:857/2224 - (38%)
Similarity:1278/2224 - (57%) Gaps:224/2224 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RMKGATLLSEGI---DEMVGIVYRPKTQETRQ---------TYEVLLSFIQEAL--GDQP----- 128
            |:.||......:   |::...:|..||:..::         |::.::.|..:.|  .|||     
Zfish     5 RLTGALRSFSNVSKQDDLTQDIYDLKTKRLKRQEIFARDGLTWQKIVQFFTQHLQKKDQPVATQE 69

  Fly   129 -RDILCGAADEILA--------------VLKNDRLKDR---ERKKDIDSLLGAVTDERFAL-LVN 174
             ::|| .||.:|:.              :.|....||:   |..:.|..:.|........| ...
Zfish    70 LKNIL-QAAKQIVGTDFGQDTIESAGVFLFKTFHNKDQIGHEETRAIKHMFGPFPASAAELSCAA 133

  Fly   175 LGKKITDFGSDAVNALTAAPNNEEQID--ETYGINVQFEESEEESDNDMYG-EIRDDDAQDEGE- 235
            :|:.:...|...|.|.....::.:..|  ..:|.|:.|       ..|.|. :.:||....:|. 
Zfish   134 VGRLVAQIGESQVEAFIQTQSSLKTPDRGSVFGRNIAF-------SFDTYVLDAQDDFPWSDGTD 191

  Fly   236 -EARIDHTLHAENLANEEAANNVKKERSLHPLDIDAYWLQRCLSKFYKDA-MVSQSK---AADVL 295
             |..:|......|...|.....|.....|...:.|...|::.:.|:..:. |||.|.   :..:.
Zfish   192 MEQTVDFHSFLNNNVGERRVGGVYSAEELEQRNTDGSILRQEVEKYLNEGNMVSSSAEELSTSLF 256

  Fly   296 KILKDAADDRDCENQLVLLLGYDCFDFIKQLKLNRQMVLYCTMLASAQTDSERQRIREKMRG--- 357
            ::|.....|.:.:|:|...||.:.|:.|.:|...|..::  ..|.|...||.......|.:|   
Zfish   257 EMLASTRSDDELQNELFEFLGLEGFEMISRLLQRRSDIV--DALVSIPADSRHHFTSGKPKGLRD 319

  Fly   358 -----------------NSALAKILRQLDTGKSEDQEEGEARGSKRG-KGDAEDGG--------- 395
                             ...:.||.|:        :|:.|.:..:|| .|::.:..         
Zfish   320 ESNMPTYGCQVTIQSEQEKQMMKIYRK--------EEKKERKRERRGDDGESSESAFHFDPMELR 376

  Fly   396 --------AAAAGQVAGVRQLLELEEMAF----------TQGSHFMANKRCQLPDGSYRKQRKGY 442
                    ||.:..|.|..:  :.|.:.:          |:.|.|:...:..||:|..|...|.|
Zfish   377 LQREQALLAARSSPVLGRHR--DYERIRYPHVYDSYGEATKTSAFIGGSKMLLPEGIRRDNNKMY 439

  Fly   443 EEVHVPALKPVPFDANEELQPVDKLPKYVQPVFEGFKTLNRIQSRLYKAALDSDENMLLCAPTGA 507
            |||.:|..:|:|....|:...|.:|.:..|.||:|.|.||||||.:::.|.:::||:|:||||||
Zfish   440 EEVEIPPNEPMPIGFEEKAVFVSELDEIGQLVFKGMKRLNRIQSIVFETAYNTNENLLICAPTGA 504

  Fly   508 GKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSLVQEMVGNFGRRLACYNLTVSELTGD 572
            ||||:|:||::.||.:|:...|.|....|||:||||||:|..||...|.:||....:.|.|||||
Zfish   505 GKTNIAMLTILHEIRQHLQPGGVIRKDQFKIVYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGD 569

  Fly   573 HQLTREQIAATQVIVCTPEKWDIITRKG-GERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTI 636
            .|||:.:|..||::|.||||||::|||. |:.....:|||:|:||:||||::||||||:|||||:
Zfish   570 MQLTKGEILRTQMLVTTPEKWDVVTRKSVGDVALSQVVRLLILDEVHLLHEDRGPVLESLVARTL 634

  Fly   637 RNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRF 701
            |.:|:||..:|::|||||||||.||||||.|.|..||||||:.:|||.|.|.::|:.....:::.
Zfish   635 RQVESTQSMIRILGLSATLPNYLDVATFLHVNPFIGLFYFDSRFRPVPLGQSFVGIKTTNKVQQL 699

  Fly   702 QVMNEIVYEKTMEH--AGRNQVLVFVHSRKETGKTARAVRDMCLEQDTLGSFLKEGSASMEVLRT 764
            ..|.|:.|||.::.  || :||:||||:|..|.:||.::.:|...:..|..|..:..|.......
Zfish   700 HDMEEVCYEKVLKQIKAG-HQVMVFVHARNSTVRTAMSLIEMAKNRGELSFFQVDQGADYGQCEK 763

  Fly   765 EAEQVKNTELKELLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIK 829
            :.::.:|.:::|:.|.||.||||||.|.||:|:|.:|:..:::|||.|||||||||||||.||||
Zfish   764 QIQRSRNKQMREMFPDGFGIHHAGMLRQDRSLMESMFSRGYLKVLVCTATLAWGVNLPAHAVIIK 828

  Fly   830 GTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFI 894
            ||.:|:.::|..|:|..|||:|:.|||||||:|..|||.:||.|.:|..||:||.||.||||||.
Zfish   829 GTNIYDAKRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFQ 893

  Fly   895 SKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHT 959
            ..|.|.|||||.||||.::.:||.||.|||||:||..||..||::|.|.:.||.||.:|.:|:..
Zfish   894 QSLADNLNAEIALGTVTNVDEAVRWLSYTYLYVRMRANPLAYGINHKAYQMDPQLELYRKELVVE 958

  Fly   960 AACCLERSGLIKYDRKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSLSSEF 1024
            :...|:::.:|::|.:||:|..|||||.|||:|:.:.|:.::|:|.....:|.::..:.|.:.||
Zfish   959 SGRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIESFNELFNAQNTEADVLSIVSKAEEF 1023

  Fly  1025 RHISVREEEKLELQKLM-ERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSDMVFITQSA 1088
            ..|.||:||..||:|:: ....:|....:|....|:|:|||.|||:.:::.|:|:||:.::.|:|
Zfish  1024 EQIKVRDEELEELEKMLCNFCELPASGGVENGYGKINILLQTYISRGEVDSFSLISDLSYVAQNA 1088

  Fly  1089 ARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIAKKLEKKHFPWGRL 1153
            ||:|||:||:.|.:.|..:..:.|.|||::|:|:|....|||||..:|.....::|.|:....:|
Zfish  1089 ARIMRALFEMALRKRWPAMTYRLLNLCKVMDKRLWGWAHPLRQFNTLPASALARMEDKNLTIDKL 1153

  Fly  1154 YDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRGTLRVELTITPDFQWDEKVHGQ- 1217
            .|:...|:|.::....:|..:.:.|||.|.:.|.:.||||||..|||.|:|||||:|:::|||. 
Zfish  1154 RDMGKDEIGHMLHHVNIGLKVKQCVHQIPAILLESSIQPITRTVLRVRLSITPDFRWNDQVHGSV 1218

  Fly  1218 SEGFWVLIEDVDSELILHHEFFLL--KQKYSQDEHQLKFFVPVFEPLPPQYFLRIVSDRWIGAET 1280
            .|.:|:.:||..::.|.|.|:|||  ||..|.:..|:.|.:|:|||:|.||::|.|||||:|:|.
Zfish  1219 GEPWWLWVEDPINDHIYHSEYFLLQKKQVVSGEPQQVVFTIPIFEPMPSQYYIRAVSDRWLGSEA 1283

  Fly  1281 QLPVSFRHLILPEKNMPPTELLDLQPLPISALRQPKFESFYSQRFPQFNPIQTQVFNAVYNSDEN 1345
            ...::|:||||||::.|.|||||||||||:||...::||.|  :|..:||||||:|:.:|::|.|
Zfish  1284 VCIINFQHLILPERHPPHTELLDLQPLPITALGNREYESLY--KFTHYNPIQTQIFHTLYHTDTN 1346

  Fly  1346 VFVGAPTGSGKMTIAEFAIMRLFTTQSDARCVYLVSEEALADLVFADW----HSKFGSLDIKVVK 1406
            |.:||||||||...||.||.|:|.....::.||:...:||......||    ..|.|.   |||:
Zfish  1347 VLLGAPTGSGKTIAAEMAIFRVFNMYPTSKVVYIAPLKALVRERIEDWKIRIEEKLGR---KVVE 1408

  Fly  1407 LTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQRKNVQLVNLFIVDELQLVGGEEGPVLEIVCS 1471
            |||:...|::.||:..|::||.:|||.:||.|:.|..||.|.:.|:||:.|:|.:.|||||::.|
Zfish  1409 LTGDNTPDMRAIAQADLIVTTPEKWDGVSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVS 1473

  Fly  1472 RMRYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNATFNFHPSVRPIPLELHIQGYNVTHNAT 1536
            |..:|||...|.:|:|.||.:|.:|||:|.|||......|||.|||||:|||:||||:...|...
Zfish  1474 RTNFISSHTSKTVRVVGLSTALANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCP 1538

  Fly  1537 RIATMSKPVYNAILKYSAHKPVIVFVSSRKQARLTAIDVLTYAASDLQPNRFFHAEEEDIKPFLE 1601
            |:|||:|||:.||..:|..|||::|||||:|.||||:|::.:.|::..|.::.|.:|.::...:.
Zfish  1539 RMATMNKPVFQAIRTHSPAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIIA 1603

  Fly  1602 RMTDKTLKETLAQGVAYLHEGLSASDHRLVEQLFDSGAVQVAVISRDLCWGMSISAHLVIIMDTQ 1666
            .:.:..||.|||.|:...|.||...|.:.||:||.:..:||.:.:..|.||::..|||||:..|:
Zfish  1604 TIRESNLKLTLAFGIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTE 1668

  Fly  1667 FYNGKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRM 1731
            :|:||...|.||||||||||:|||.||..|...|.|::....||||:|||:.||.|:||.|...:
Zfish  1669 YYDGKTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVL 1733

  Fly  1732 HDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLE 1796
            .||.|||:...|:.:||||:||:|||:.:|||..||:||||..::|..::.:||.|||.:|.|||
Zfish  1734 SDHLNAEIAAGTVTSKQDAMDYITWTYFFRRLVMNPSYYNLDDISHETINKYLSNLVERSLRDLE 1798

  Fly  1797 QSKCISVEDDMDTL-PLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVR 1860
            .|.|:.::.|..|: ||..|.|::|||:.:.||.:|...|..:..|..||.|:|.|.||.::.||
Zfish  1799 CSYCMEIQQDEQTIEPLTYGRISSYYYLKHQTIRMFKERLKPELPVHELLAILSEAEEYAELPVR 1863

  Fly  1861 HHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQG-DTEQILSKAI 1924
            |:|:|:...|:||||.:: .|:    .::..|.||:||||||.||.||.....| ||:.:|..||
Zfish  1864 HNEDQLNSELAQRLPLQV-NPH----SYDSAHTKTHLLLQAHFSRAQLPCSDYGTDTKTVLDNAI 1923

  Fly  1925 RLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFS------------------ 1971
            |:.||.:||:::.|||..|::...|.||:.||.|..||.|..|||..                  
Zfish  1924 RICQAMLDVVANEGWLVSALSLCNLVQMIIQARWLHDSSLLTLPHIQKQELYVFRRWSSRGVRAG 1988

  Fly  1972 ----------PEIVKRCTEKKIETVFDIMELEDEDRTRLLQLSDLQMADVARFCNRYPNIELNYE 2026
                      ||::..|..|  |.:|..|..|      :||.:  |::...::.::.|.:|::..
Zfish  1989 CGHQGPIEGLPELIAACDGK--EDIFTSMVKE------VLQPN--QISQAWQYVSQLPVLEISLS 2043

  Fly  2027 VVDKDRINSGSTVNVVVQLER---------EDEVT-----------------------------G 2053
            |       .|...|.|.|.||         .||.:                             .
Zfish  2044 V-------KGFWENSVEQTERAVPAQVSSIRDESSWLPLHADQEYVLQVSMRRLNAGQHRRKQDS 2101

  Fly  2054 PVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRL-TLQQKAKVKLDFVAP-SPGKHDYTLYYMSDS 2116
            ...||.||:.::|||::|:|:.:...||::||: .::..:.|.:.|..| ..||..||||.||||
Zfish  2102 RAQAPRFPKPKDEGWFLVLGEVEKKELLAVKRVGFVRNHSSVSVAFYTPEKTGKCIYTLYLMSDS 2166

  Fly  2117 YLGCDQEYKFSIEV 2130
            |||.||:|...:.|
Zfish  2167 YLGLDQQYDMHLNV 2180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brr2NP_648818.3 Helicase_PWI 259..368 CDD:436309 27/132 (20%)
DEXHc_Brr2_1 464..677 CDD:350777 120/213 (56%)
BRR2 476..1020 CDD:440817 271/546 (50%)
Sec63 982..1285 CDD:460740 123/306 (40%)
BRR2 1309..1848 CDD:440817 246/543 (45%)
DEXHc_Brr2_2 1325..1514 CDD:350779 86/192 (45%)
Sec63 1811..2127 CDD:460740 124/384 (32%)
ascc3XP_073781783.1 None

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