DRSC/TRiP Functional Genomics Resources

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Protein Alignment elgi and TRAF4

DIOPT Version :10

Sequence 1:NP_648816.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_011523806.1 Gene:TRAF4 / 9618 HGNCID:12034 Length:477 Species:Homo sapiens


Alignment Length:170 Identity:45/170 - (26%)
Similarity:64/170 - (37%) Gaps:36/170 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQP-TCPVDRNSLTTANL 65
            |:|. :|..:....|.||:|...:.:|:|...|.|.||..|:.|:|:... .||.|:..|..|..
Human     3 GFDY-KFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLPLDYAKF 66

  Fly    66 -RAVPRI-----LRNLLSRLSITCDNAPYGCTAVLKLDAYNSHLDECIHN--------------- 109
             ...|:|     |...:..|.|.|.::..||.....|.....||:.|..|               
Human    67 PHPYPQIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVIPCPNRCPMKLSRR 131

  Fly   110 ----------PKRPFPCEKGCGFDIPKDELKDHN--CVRE 137
                      |||...|| .||.|...:..:.|.  |.:|
Human   132 DLPAHLQHDCPKRRLKCE-FCGCDFSGEAYESHEGMCPQE 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_648816.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 15/42 (36%)
USP8_interact 137..315 CDD:430333 1/1 (100%)
TRAF4XP_011523806.1 mRING-HC-C3HC3D_TRAF4 15..59 CDD:438303 16/43 (37%)
zf-TRAF 109..163 CDD:280357 12/54 (22%)
PLN03086 <120..218 CDD:178635 11/52 (21%)
zf-TRAF 217..276 CDD:280357
MATH_TRAF4 315..470 CDD:239750
Blue background indicates that the domain is not in the aligned region.

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