DRSC/TRiP Functional Genomics Resources

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Protein Alignment elgi and AT3G58400

DIOPT Version :9

Sequence 1:NP_001261904.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001319794.1 Gene:AT3G58400 / 825009 AraportID:AT3G58400 Length:293 Species:Arabidopsis thaliana


Alignment Length:157 Identity:31/157 - (19%)
Similarity:52/157 - (33%) Gaps:39/157 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PLQAVMCEHAFCRGCINEWLTRQPTCPVD----RNSLTTANLRAVPRILRNLLSRLSITCDNAPY 88
            |.||....|.|         .|.|....:    .:||.|..:        :||..|..|...:|.
plant   157 PSQAKSVSHIF---------ERHPEIASEIHPKNSSLRTGYM--------SLLLSLIETLSQSPQ 204

  Fly    89 GCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELKDHNCVREL------RTLIVKQTE 147
            ..:.....|.|.:            ..|.|..||.:...|.|.:...::.      .|.:.:..|
plant   205 ELSKDDLCDVYIA------------IGCMKNAGFKLDWLENKLYEVAQKKEDDEAGETRLREMEE 257

  Fly   148 KMGELKSELTDQQLTINELKRELQLFK 174
            |:.:||.:.:..:..:.|.|.::...|
plant   258 KLKDLKLKCSKMEALVEEEKAKVSAAK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_001261904.1 RING 17..55 CDD:238093 7/26 (27%)
Sina 83..>157 CDD:302762 14/79 (18%)
USP8_interact 137..315 CDD:286082 8/44 (18%)
AT3G58400NP_001319794.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D918518at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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