Protein Alignment elgi and COP1

DIOPT Version :10

• Sequence 1: NP_648816.1
• Gene: elgi / 39735
• FlyBaseID: FBgn0283649
• Length: 315
• Species: Drosophila melanogaster
• Sequence 2: NP_180854.1
• Gene: COP1 / 817857
• AraportID: AT2G32950
• Length: 675
• Species: Arabidopsis thaliana
• Alignment Length: 172
• Identity: 43/172 - (25%)
• Similarity: 69/172 - (40%)
• Gaps: 42/172 - (24%)

  Fly    11 EVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQPTCPVDRNSLTTANLRAVPR-ILRN 74
            ::|::|.||||..:::|.. ...|.|:||..||...|..:..||.....||  |.:..|. :|..
plant    45 DLDKDLLCPICMQIIKDAF-LTACGHSFCYMCIITHLRNKSDCPCCSQHLT--NNQLYPNFLLDK 106

  Fly    75 LLSRLSITCDNAPYGCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELKDHNCVRELR 139
            ||.:.|     |.:.......||.:...|             ::||...|.:        |..|.
plant   107 LLKKTS-----ARHVSKTASPLDQFREAL-------------QRGCDVSIKE--------VDNLL 145

  Fly   140 TLIVKQTEKMGELKSELTDQQLTINELKRELQLFKDFMRAMR 181
            ||:.::..||.:            .|.:|.:|:..||:..:|
plant   146 TLLAERKRKMEQ------------EEAERNMQILLDFLHCLR 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elgi	NP_648816.1	mRING-HC-C3HC3D_Nrdp1	15..57	CDD:438296	15/41 (37%)
		USP8_interact	137..315	CDD:430333	11/45 (24%)
COP1	NP_180854.1	RING-HC_COP1	48..94	CDD:438167	15/46 (33%)
		PLN00181	<148..671	CDD:177776	8/40 (20%)
		WD40 repeat	375..418	CDD:293791
		WD40 repeat	423..460	CDD:293791
		WD40 repeat	467..503	CDD:293791
		WD40 repeat	508..546	CDD:293791
		WD40 repeat	552..587	CDD:293791
		WD40 repeat	594..617	CDD:293791
		WD40 repeat	647..670	CDD:293791