DRSC/TRiP Functional Genomics Resources

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Protein Alignment elgi and traf2a

DIOPT Version :10

Sequence 1:NP_648816.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_073808310.1 Gene:traf2a / 564295 ZFINID:ZDB-GENE-071120-2 Length:575 Species:Danio rerio


Alignment Length:273 Identity:53/273 - (19%)
Similarity:81/273 - (29%) Gaps:107/273 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAF---------------CRGCINEWLTRQP 51
            |:.......:::::..|.||..:|..|.|| .|.|.|               |..||.|.:..:|
Zfish    18 GFPKKILANKLEDKHLCNICLKILRRPFQA-QCGHRFCSYCFNKAVSSGPQKCSACIKEDIFEEP 81

  Fly    52 T-----------------------------------------------------CP-----VDRN 58
            |                                                     ||     :..|
Zfish    82 TSILKQGCAFPDNAAKREVEALEAVCINEECSWTGTIKEYEANHEGKCDFRILPCPSCKELLRAN 146

  Fly    59 SLTTANLRAVP-RIL-----------RNLLSRLSITCDNAPYGCTAVLK----LDAYNSHLDECI 107
            .|...|.|..| |.|           :|:.:...| |...|..|....|    .:.|..|:..| 
Zfish   147 ELERHNERECPERTLNCKYCKEPFHFKNIKAHDEI-CPKYPMICEGCAKKKIPREKYVDHIKLC- 209

  Fly   108 HNPKRPFPCE---KGCGFDIPKDELKDHN--CVRELRTLIVK-------QTEKMGELKSELTDQQ 160
              .|...||.   .||...:.|:::.||.  |..|...|::.       ..|.:.....||...:
Zfish   210 --TKFRTPCRFHVVGCDMTVEKEKIHDHEQACSYEHLNLLLHFIMGIKVNLESLQPQSLELASHK 272

  Fly   161 L-TINELKRELQL 172
            : .:::..|||:|
Zfish   273 IHELHQSLRELEL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_648816.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 18/114 (16%)
USP8_interact 137..315 CDD:430333 9/44 (20%)
traf2aXP_073808310.1 None

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