DRSC/TRiP Functional Genomics Resources

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Protein Alignment elgi and rnf41

DIOPT Version :10

Sequence 1:NP_648816.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_998681.1 Gene:rnf41 / 406837 ZFINID:ZDB-GENE-040426-2920 Length:318 Species:Danio rerio


Alignment Length:315 Identity:180/315 - (57%)
Similarity:247/315 - (78%) Gaps:0/315 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQPTCPVDRNSLTTANL 65
            |||||.||||||||:|.|||||||||:|::|..||||||..||.:|..:|..|||||..:|.|:|
Zfish     1 MGYDVTRFQGEVDEDLLCPICSGVLEEPVRAPHCEHAFCNACITQWFAQQQICPVDRTVVTLAHL 65

  Fly    66 RAVPRILRNLLSRLSITCDNAPYGCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELK 130
            |.||||:||:||:|.|:||||.:||||.|:||...|||.:|.||||||..||:|||.::||||:.
Zfish    66 RPVPRIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVTCEEGCGLEMPKDEMP 130

  Fly   131 DHNCVRELRTLIVKQTEKMGELKSELTDQQLTINELKRELQLFKDFMRAMRVSNPAMRAIADQME 195
            :|||::.||:::.:|..|:.:|:....:.:..:.|.||::||.|.:|||:|.:||.::.:.:.:|
Zfish   131 NHNCIKHLRSVVQQQQTKIADLEKTAAEHKHQLAEQKRDIQLLKAYMRAIRSANPNLQNLEESIE 195

  Fly   196 RDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHERRWPRGLS 260
            .:|::.|.::|..||||||||||||||..||.:|||:|.:||||..|::.|:|..|||.||:||:
Zfish   196 YNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPLSIVNDLIENAHERNWPQGLA 260

  Fly   261 SLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAHGIE 315
            :|||||.|||.|:|||.:||||||||:|::|:|.||.||::::||||||||||:|
Zfish   261 TLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMILEPGLVMIFAHGVE 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_648816.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 25/41 (61%)
USP8_interact 137..315 CDD:430333 92/177 (52%)
rnf41NP_998681.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 25/41 (61%)
USP8_interact 137..315 CDD:430333 92/177 (52%)

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