Protein Alignment elgi and Traf2

DIOPT Version :10

• Sequence 1: NP_648816.1
• Gene: elgi / 39735
• FlyBaseID: FBgn0283649
• Length: 315
• Species: Drosophila melanogaster
• Sequence 2: NP_001101285.1
• Gene: Traf2 / 311786
• RGDID: 1310457
• Length: 497
• Species: Rattus norvegicus
• Alignment Length: 299
• Identity: 53/299 - (17%)
• Similarity: 93/299 - (31%)
• Gaps: 107/299 - (35%)

  Fly     2 GYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQP-TCPV--------DR 57
            |:........::.:..|..|..:|..|.|| .|.|.:|..|:...|:..| .|..        :.
  Rat    18 GFSKTLLGTRLEAKYLCSACRNILRRPFQA-QCGHRYCSFCLTSILSSGPQNCAACVHEGLYEEG 81

  Fly    58 NSLTTANLRAVPRILRNLLSRLSITCDN-------------------APY------GCTAVLKLD 97
            .|:..::........|..:..|...|.|                   .|:      .|..:::|.
  Rat    82 ISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKEYESCHEGLCPFLLTECPACKGLVRLS 146

  Fly    98 AYNSHLDE---------------CIHN---------PKRPFPCEKGCGFDIPKDELKDH--NCVR 136
            ....|.::               |.|.         ||.|..|: |||..|.:::|:||  .|.:
  Rat   147 EKKHHTEQECPKRSLSCQHCRAPCSHADLELHYEVCPKFPLTCD-GCGKKISQEKLQDHVRTCSK 210

  Fly   137 ------------------------ELRTLIVKQTEKMGELKSELTDQQLTINELKREL------- 170
                                    ||:.|    .|.:..|.|...:.|.:.|::..||
  Rat   211 CRVLCRFHAIGCSELVETEDLQDHELQRL----REHLALLLSSFLESQASQNQVGPELLQRCQIL 271

  Fly   171 -QLFKDFMRAMRVSNPAMRAIA---------DQMERDEV 199
             |....|...:.|.|..:..:|         .::::|::
  Rat   272 EQKIATFENIVCVLNREVERVAVTAEACSRQHRLDQDKI 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
elgi	NP_648816.1	mRING-HC-C3HC3D_Nrdp1	15..57	CDD:438296	13/50 (26%)
		USP8_interact	137..315	CDD:430333	16/80 (20%)
Traf2	NP_001101285.1	RING-HC_TRAF2	31..73	CDD:438301	13/42 (31%)
		zf-TRAF	178..234	CDD:280357	12/56 (21%)
		TRAF_BIRC3_bd	263..326	CDD:465226	8/48 (17%)
		MATH_TRAF2	330..493	CDD:239747