DRSC/TRiP Functional Genomics Resources

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Protein Alignment elgi and Traf4

DIOPT Version :10

Sequence 1:NP_648816.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_319165.4 Gene:Traf4 / 1279446 VectorBaseID:AGAMI1_008008 Length:483 Species:Anopheles gambiae


Alignment Length:200 Identity:42/200 - (21%)
Similarity:71/200 - (35%) Gaps:41/200 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ITCDNAPYGCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELKDH---NCVRELRTLI 142
            :.|.:...||....:|....:||:.|.|:   ...|...||..||:..:.||   .|:  ||..|
Mosquito    97 VFCIHHKQGCKWSDELRKLKAHLNTCKHD---AIQCPNKCGSQIPRVMMTDHLAFTCI--LRRAI 156

  Fly   143 ----------VKQTEKMGELKSE--LTDQQLTINELKRELQLF--KDFMRAMRVSNPAMRAIADQ 193
                      :...|..|...||  ..:.:.....|:..:.:.  ||..:.:|......|...  
Mosquito   157 CEFCNVEFTGIGLEEHAGTCSSEPIYCESKCGTRVLRGRMSIHRAKDCAKRLRRCPHCGREFC-- 219

  Fly   194 MERDEVIRWSSTLPRARVTRWGGMISTP-----------DDALQLMIKRALSESGC----PPHIL 243
              .|.:....:|.||:.:.......:.|           |:...|.:.....|:||    |.|:|
Mosquito   220 --ADTLAAHGATCPRSPIPCPQRCDAGPFARADLDAHLRDECKALTVPCTFKEAGCRFKGPRHLL 282

  Fly   244 DSLME 248
            ::.:|
Mosquito   283 EAHLE 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_648816.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296
USP8_interact 137..315 CDD:430333 25/140 (18%)
Traf4XP_319165.4 None
Blue background indicates that the domain is not in the aligned region.

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