DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment elgi and RNF41

DIOPT Version :9

Sequence 1:NP_001261904.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001229755.1 Gene:RNF41 / 10193 HGNCID:18401 Length:317 Species:Homo sapiens


Alignment Length:315 Identity:181/315 - (57%)
Similarity:248/315 - (78%) Gaps:0/315 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQPTCPVDRNSLTTANL 65
            |||||.||||:|||:|.|||||||||:|:||..||||||..||.:|.::|.||||||:.:|.|:|
Human     1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHL 65

  Fly    66 RAVPRILRNLLSRLSITCDNAPYGCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELK 130
            |.||||:||:||:|.|.||||.:||:||::||...|||.:|.||||||..||:|||.::|||||.
Human    66 RPVPRIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELP 130

  Fly   131 DHNCVRELRTLIVKQTEKMGELKSELTDQQLTINELKRELQLFKDFMRAMRVSNPAMRAIADQME 195
            :|||::.||:::.:|..::.||:....:.:..:.|.||::||.|.:|||:|..||.::.:.:.:|
Human   131 NHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQNLEETIE 195

  Fly   196 RDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHERRWPRGLS 260
            .:|::.|.::|..||||||||||||||..||.:|||:|.|||||..|::.|:|..|||.||:||:
Human   196 YNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLA 260

  Fly   261 SLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAHGIE 315
            :|||||.|||.|:|||.:||||||||:|::|:|.||.:|::.:||||||||||:|
Human   261 TLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVMIFAHGVE 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_001261904.1 RING 17..55 CDD:238093 24/37 (65%)
Sina 83..>157 CDD:302762 38/73 (52%)
USP8_interact 137..315 CDD:286082 92/177 (52%)
RNF41NP_001229755.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:319548 27/41 (66%)
USP8_interact 137..315 CDD:401040 92/177 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 203 1.000 Domainoid score I2975
eggNOG 1 0.900 - - E1_KOG0297
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4226
Inparanoid 1 1.050 408 1.000 Inparanoid score I1892
Isobase 1 0.950 - 0 Normalized mean entropy S4310
OMA 1 1.010 - - QHG48595
OrthoDB 1 1.010 - - D422158at33208
OrthoFinder 1 1.000 - - FOG0007809
OrthoInspector 1 1.000 - - oto91162
orthoMCL 1 0.900 - - OOG6_107745
Panther 1 1.100 - - LDO PTHR15315
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5674
SonicParanoid 1 1.000 - - X5758
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

Return to query results.
Submit another query.