DRSC/TRiP Functional Genomics Resources

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Protein Alignment elgi and rnf151

DIOPT Version :10

Sequence 1:NP_648816.1 Gene:elgi / 39735 FlyBaseID:FBgn0283649 Length:315 Species:Drosophila melanogaster
Sequence 2:XP_004918118.1 Gene:rnf151 / 101733072 XenbaseID:XB-GENE-6467161 Length:212 Species:Xenopus tropicalis


Alignment Length:222 Identity:67/222 - (30%)
Similarity:95/222 - (42%) Gaps:39/222 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GYDVNRFQGEVDEELTCPICSGVLEDPLQAVMCEHAFCRGCINEWLTRQPTCPVDRNSLTTANLR 66
            |||:..|....|.:|.|.||.||:..|:. :.|.|.|||.||.:||.||.|||..|..: ...|.
 Frog     4 GYDIELFTKTPDYDLLCSICHGVMRCPVM-ISCGHIFCRNCIMQWLKRQRTCPCCRTEV-RGKLY 66

  Fly    67 AVPRILRNLLSRLSITCDNAPYGCTAVLKLDAYNSHLDEC------------------------I 107
            .:...|:..::||.:.|.|...||.|...|.....|.:.|                        |
 Frog    67 VLMHKLKRKINRLDVKCPNEQNGCPAHFALVHSQEHAEYCAYGAVPCSNEGCPAEVLRKDMCDHI 131

  Fly   108 HNPK--RPFPCEKGCGFDIPKDELKDHNCVRELRTLIVKQTEKMGELKSELTDQQLTINELKREL 170
            ||.:  |.. |..|||..:..:..:.|||.:||:....||..|   ||.:....:....::.|:|
 Frog   132 HNCRYWRQH-CHMGCGTLLHPENRETHNCYQELKEDYAKQLYK---LKQKANRMETICCQISRQL 192

  Fly   171 QLFKDFMRAMRVSNPAMRAIADQMERD 197
            |:..|   :|..:.||    ||..|.:
 Frog   193 QMMND---SMETAQPA----ADTGETE 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
elgiNP_648816.1 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 21/41 (51%)
USP8_interact 137..315 CDD:430333 17/61 (28%)
rnf151XP_004918118.1 RAD18 11..>157 CDD:227719 43/148 (29%)
RING-HC_RNF151 15..63 CDD:438209 23/49 (47%)

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