DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GXIVsPLA2 and B0478.3

DIOPT Version :9

Sequence 1:NP_001261903.1 Gene:GXIVsPLA2 / 39734 FlyBaseID:FBgn0036545 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_501074.1 Gene:B0478.3 / 182001 WormBaseID:WBGene00015202 Length:151 Species:Caenorhabditis elegans


Alignment Length:93 Identity:29/93 - (31%)
Similarity:39/93 - (41%) Gaps:19/93 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 SLGLRISTDYLP-----------AKEMETCCNDHDICYDTCNSDKELCDLDFKRCLYKYCDSYEK 155
            |.|....|:::|           ...|..||..||.||:| ...|:.||.:|..||   ..:.||
 Worm    55 SCGANRFTEFIPQLFNSTECKNLRDPMNVCCETHDNCYNT-QIGKDFCDNEFCLCL---STATEK 115

  Fly   156 SIASDLMMKGCKAAAKMLF--TGTLTLG 181
            ::.:......|  ||..||  |...|||
 Worm   116 NLCAVDAAGFC--AAVRLFGETAYNTLG 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GXIVsPLA2NP_001261903.1 Phospholip_A2_3 18..199 CDD:421899 29/93 (31%)
B0478.3NP_501074.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1299904at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12824
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.