DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Prkcq

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001263650.1 Gene:Prkcq / 85420 RGDID:620968 Length:707 Species:Rattus norvegicus


Alignment Length:353 Identity:121/353 - (34%)
Similarity:201/353 - (56%) Gaps:18/353 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 DDGNETDDEEDDDESEESSSVQTAKGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISEKYCAMKI 304
            |..::|....:.:.:.:.:|:|.     |..:||:.:.|.:|.|:||:|.|...:.::::.|:|.
  Rat   351 DGADKTAQPPEPEVNLQRASLQL-----KLKIDDFILHKMLGKGSFGKVFLAEFKRTKQFFAIKA 410

  Fly   305 LAMTEVIRLKQIEHVKNERNILR-EIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGK 368
            |....|:....:|....|:.:|. ...|||:..:..:.:...||:.:.:|:.||:|..::::..|
  Rat   411 LKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK 475

  Fly   369 FTSQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKK--LRD-RTWTLC 430
            |....:.||||||:..|::|||..|||||||.:|:|::||||:||.|||..|:  |.| :|.|.|
  Rat   476 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDRDGHIKIADFGMCKENMLGDAKTNTFC 540

  Fly   431 GTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFYDEQPFGIYEKILSGKIEWERHMDPI 495
            |||:||||||:..:.:|.:||||:.|||:||||:|..||:.:....::..|......:.|.::..
  Rat   541 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLERE 605

  Fly   496 AKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTKNFD- 559
            ||||:.||.|.:..||||    ...|:::|..|:.:||.::..|::.||..|.|....|..||| 
  Rat   606 AKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPYDCSNFDK 666

  Fly   560 ----DYPEKDWKPAKAVDQRDLQYFNDF 583
                :.|...:.....::..|...|::|
  Rat   667 EFLSEKPRLSFADRALINSMDQNMFSNF 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 112/299 (37%)
PrkcqNP_001263650.1 C1_nPKC_theta-like_rpt1 153..213 CDD:410384
C1_nPKC_theta-like_rpt2 232..281 CDD:410387
STKc_nPKC_theta 374..704 CDD:270770 117/325 (36%)
Blue background indicates that the domain is not in the aligned region.

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