DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and RSH3

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_173094.4 Gene:RSH3 / 838214 AraportID:AT1G16440 Length:499 Species:Arabidopsis thaliana


Alignment Length:529 Identity:130/529 - (24%)
Similarity:223/529 - (42%) Gaps:151/529 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 RSSSNVASSESSDPLESDYSEEDPEQEQQRPDPATNSRSSSTATTTTTSSADHDNDVDEEDEEDD 215
            :..:.:.|.|:|...:|..:..:.:.:||:|                  ..|....|::..::.:
plant     4 KPGNKLVSPETSHHRDSASNSSNHKCQQQKP------------------RKDKQKQVEQNTKKIE 50

  Fly   216 ENEGEGNGRDADDAT-----HDSSESIEEDDGNETDDEEDDDESEESSSVQTAKGVR-------- 267
            |::.:      .::|     |:.:.|.:.::...|       .:..||...|...:|        
plant    51 EHQIK------SESTLLISNHNVNMSSQSNNSEST-------STNNSSKPHTGGDIRWDAVNSLK 102

  Fly   268 ----KYHLDDYQIIKTVGTGTFGRVCL--CRDRISEKYCAMKILAMTEVIRLKQIEHVKNERNIL 326
                |..:.|::::|.:|.|..|.|.|  .:......|.|||::....::...::...:.||.||
plant   103 SRGIKLGISDFRVLKRLGYGDIGSVYLVELKGANPTTYFAMKVMDKASLVSRNKLLRAQTEREIL 167

  Fly   327 REIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGK--FTSQTSNFYAAEIVSALEYLH 389
            .::.|||:.:|....:.|....::.::..||.|::..:....  ||...:.|:|:|::.||||||
plant   168 SQLDHPFLPTLYSHFETDKFYCLVMEFCSGGNLYSLRQKQPNKCFTEDAARFFASEVLLALEYLH 232

  Fly   390 SLQIVYRDLKPENLLINRDGHLKITDFGF------------------------------------ 418
            .|.||||||||||:|:..|||:.::||..                                    
plant   233 MLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCSVNPTLVKSFNGGGTTGIIDDNAAVQGCYQPS 297

  Fly   419 ---------AKKLRD-------------------RTWTLCGTPEYIAPEIIQSKGHNKAVDWWAL 455
                     :||.|.                   ::.:..||.||:|||||:::||..|||||..
plant   298 AFFPRMLQSSKKNRKSKSDFDGSLPELMAEPTNVKSMSFVGTHEYLAPEIIKNEGHGSAVDWWTF 362

  Fly   456 GVLIYEMLVGYPPFYDE-----------QP--FGIYEKILSGKIEWERHMDPIAKDLIKKLLVND 507
            |:.|||:|.|..||..:           ||  |..|.::.|           .||||||.|||.:
plant   363 GIFIYELLHGATPFKGQGNKATLYNVIGQPLRFPEYSQVSS-----------TAKDLIKGLLVKE 416

  Fly   508 RTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTKNFDDY--PEKDWKPAK 570
            ...|:. .|.||.::|:|.:|:.:||..:..:  .||.||      :..:|..|  .||:..|..
plant   417 PQNRIA-YKRGATEIKQHPFFEGVNWALIRGE--TPPHLP------EPVDFSCYVKKEKESLPPA 472

  Fly   571 AVDQRDLQY 579
            |.:::...:
plant   473 ATEKKSKMF 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 107/373 (29%)
RSH3NP_173094.4 STKc_phototropin_like 111..457 CDD:270726 105/365 (29%)

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