DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Rps6ka1

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_006239145.1 Gene:Rps6ka1 / 81771 RGDID:620675 Length:741 Species:Rattus norvegicus


Alignment Length:328 Identity:118/328 - (35%)
Similarity:194/328 - (59%) Gaps:12/328 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 GNETDDEEDDDE---SEESSSVQTAKGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISE----KY 299
            |..:..::|.||   .|.|.:.....|..|.....::::|.:|.|:||:|.|.| :::.    ..
  Rat    33 GPGSGPQQDSDEGILKEISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVR-KVTRPDNGHL 96

  Fly   300 CAMKILAMTEVIRLKQIEHVKNERNILREIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLR 364
            .|||:|... .::::.....|.||:||.::.||||:.|.::.:.:..||:|.|::.||:|||.|.
  Rat    97 YAMKVLKKA-TLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 160

  Fly   365 NAGKFTSQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKKLRD---RT 426
            ....||.:...||.||:...|::||||.|:||||||||:|::.:||:|:||||.:|:..|   :.
  Rat   161 KEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA 225

  Fly   427 WTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFYDEQPFGIYEKILSGKIEWERH 491
            ::.|||.||:|||::..:||..:.|||:.|||::|||.|..||..:........||..|:...:.
  Rat   226 YSFCGTVEYMAPEVVNRQGHTHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF 290

  Fly   492 MDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTK 556
            :...|:.|::.|...:...|||:..:||:::|||.::..::||.:|.:::|||..|.|....||.
  Rat   291 LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHIFYSTIDWNKLYRREIKPPFKPAVAQPDDTF 355

  Fly   557 NFD 559
            .||
  Rat   356 YFD 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 110/295 (37%)
Rps6ka1XP_006239145.1 STKc_RSK_N 72..388 CDD:270734 110/289 (38%)
STKc_RSK1_C 422..712 CDD:271077
Blue background indicates that the domain is not in the aligned region.

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