DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and prkcq

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_009298659.1 Gene:prkcq / 555521 ZFINID:ZDB-GENE-041210-195 Length:719 Species:Danio rerio


Alignment Length:429 Identity:135/429 - (31%)
Similarity:213/429 - (49%) Gaps:44/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 EQEQQRPDPATNSRSSSTATTTTTSSADHDNDVDEEDEEDDENEGEGNGR-------DADDATHD 232
            |..||:   |.:||.:.|.......|||....:.|.           :||       .|......
Zfish   302 ESTQQQ---ARSSRDTETVGREGPVSADQPGVIREP-----------SGRLAISPLTPAPPLPRK 352

  Fly   233 SSESIEEDDGNETDDEEDDDESEESSSVQTAKGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISE 297
            ..:.|..|  :..|......|..|.......|...|:.:|.:.:.|.:|.|:||:|.|...:.|.
Zfish   353 EHQGISWD--SPADGRRPSLEEPEPLYATPRKEHHKFTIDSFILHKMLGKGSFGKVFLAELKGSG 415

  Fly   298 KYCAMKILAMTEVIRLKQIEHVKNERNILR-EIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFT 361
            ::.|:|.|....|:....:|....||.:|. ...|||:..|..:.:...||:.:.:|:.||:|..
Zfish   416 QFFAVKALKKDVVLMDDDVECTMVERRVLSLAWDHPFLTHLYCTFQTKENLFFVMEYLNGGDLMF 480

  Fly   362 YLRNAGKFTSQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKKL---R 423
            :::...:|....|.||||||:..|::|||..|||||||.:|:|::.|||:||.|||..|:.   .
Zfish   481 HIQTCHRFDLPRSTFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENIIGE 545

  Fly   424 DRTWTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFYDEQPFGIYEKILSGKIEW 488
            .||.|.||||:||||||:..:.:..:||||:.|||:||||:|..||:......:::.|.:....:
Zfish   546 ARTCTFCGTPDYIAPEILLGQKYGTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRTDDPCY 610

  Fly   489 ERHMDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDG 553
            .|.:...|:|::.||.|.:..:|||...|    :::|.:|:..:|:.:..::::||..|.|....
Zfish   611 PRWLTRDARDILVKLFVREPERRLGVKGN----IRQHPFFRETDWSALEERQVEPPFKPTVKSAN 671

  Fly   554 DTKNFDDYPEKDW---KPAKAVDQR------DLQYFNDF 583
            |..|||    |::   ||..:|..|      |...|.:|
Zfish   672 DCSNFD----KEFINEKPRLSVTDRMMINSMDQSMFENF 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 106/294 (36%)
prkcqXP_009298659.1 C1_nPKC_theta-like_rpt1 159..219 CDD:410384
C1_nPKC_theta-like_rpt2 238..287 CDD:410387
STKc_nPKC_theta 386..716 CDD:270770 115/329 (35%)
Blue background indicates that the domain is not in the aligned region.

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