DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pka-C3 and aPKC

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:410 Identity:125/410 - (30%)
Similarity:204/410 - (49%) Gaps:53/410 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 VDEEDEEDDE----------NEGEGNGRDADDATHDSSESIEEDDGNETDDEEDDDESEESSSVQ 261
            |.|..||..:          .|....|.:|.: |||.:..:.        ....:|..|..:.  
  Fly   555 VKERAEESSDPIPVPLPPLPYEAMSGGAEACE-THDHAHIVA--------PPPPEDPLEPGTQ-- 608

  Fly   262 TAKGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISEKYCAMKILAMTEVIRLKQIEHVKNERNIL 326
                 |:|.|:|:::|:.:|.|::.:|.:...|.:.:..|||::....|...:.|:.|:.|:::.
  Fly   609 -----RQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDDEDIDWVQTEKHVF 668

  Fly   327 REI-RHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFTSQTSNFYAAEIVSALEYLHS 390
            ... .|||::.|....:..|.|:.:.::|.||:|..:::...:...:.:.||||||..||.:||.
  Fly   669 ETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFYAAEISLALNFLHE 733

  Fly   391 LQIVYRDLKPENLLINRDGHLKITDFGFAKK-LR--DRTWTLCGTPEYIAPEIIQSKGHNKAVDW 452
            ..|:|||||.:|:|::.:||:|:||:|..|: :|  |.|.|.||||.||||||::.:.:..:|||
  Fly   734 KGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 798

  Fly   453 WALGVLIYEMLVGYPPF----YDEQPFG-----IYEKILSGKIEWERHMDPIAKDLIKKLLVNDR 508
            ||||||:||||.|..||    ..|.|..     :::.||...|...|.:...|..::|..|..:.
  Fly   799 WALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVRAASVLKGFLNKNP 863

  Fly   509 TKRLGNMKNGA-DDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTKNFDD---------YPE 563
            ..|||..:..| .|:..|.:||:::|..:..|::.||..|.:..|.|..||..         .|:
  Fly   864 ADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFPPEFTGEAVQLTPD 928

  Fly   564 KDWKPAKAVDQRDLQYFNDF 583
            .|    ..:|..|...|..|
  Fly   929 DD----HVIDNIDQSEFEGF 944

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 104/313 (33%)
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344
STKc_aPKC 620..947 CDD:270740 108/329 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.