DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Pkcdelta

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster


Alignment Length:665 Identity:168/665 - (25%)
Similarity:281/665 - (42%) Gaps:162/665 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 HDSASGLRAGLATPTQRGKATGDNGTTGTPARTIGKPQARIA--TAMSTATCARFCTPLSSGTAG 102
            |:.....:...||......||||..||.|.. |||.....:|  ..:::|..|......:..|..
  Fly  1208 HEEQQRQQQQQATNASSPAATGDATTTPTTI-TIGVAAVNVAAVAVVASAAAAAATDAAADATTS 1271

  Fly   103 STSKLTTGNGSGNTMTSAYK------------------IPSNNSTTANDSSNTETTFTFKLGRSN 149
            .:|..:.|.|.||.::....                  |||:...:..|..:.:.        .:
  Fly  1272 LSSNNSCGEGVGNNLSKFATVSNLAQCLRDVDAELDDYIPSSAENSQEDDDDDDD--------GS 1328

  Fly   150 GRSSSNVASSES----SDPLESDYSEEDPEQ--------EQQRPDPATNSRSSSTATTTTTSSAD 202
            |.||.:.:|.:.    |..::....:|..:|        |.:|.||....:..:|........|.
  Fly  1329 GSSSDDYSSVDGCANLSASMKKKLRKEKKKQKAKAAAAAEAKRFDPHKKIKIDTTNKCYVKEEAP 1393

  Fly   203 H-------------------DNDVDEE------------DEEDDENEGE--------GNGRDAD- 227
            .                   |.:.|:|            ::.|||:.||        .:..|.| 
  Fly  1394 RYPLVATPRPLWKREKIVYSDENTDDESGSEEGSGGSLDEDSDDESGGEECSSTSSSASSEDLDA 1458

  Fly   228 ----------DATH--DSSESIEEDDG------------------------------NETDDEED 250
                      :||.  |||.|...:.|                              |::..|..
  Fly  1459 VAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGG 1523

  Fly   251 DDESEESSSVQTA-------------------KGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRIS 296
            ...|.....::|:                   ...:.|.:||:..:..:|.|:||:|.|...|.:
  Fly  1524 TAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDT 1588

  Fly   297 EKYCAMKILAMTEVIRLKQIEHVKNERNILR-EIRHPFVISLEWSTKDDSNLYMIFDYVCGGELF 360
            ..|.|:|.|....|:....::....||.:|. ..:||::..|..:.:.:|:|:.:.:|:.||:|.
  Fly  1589 TYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLM 1653

  Fly   361 TYLRNAGKFTSQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAK----- 420
            .:::.:|:|:.:.:.||.|||:|.|::||...|:|||||.:|:|::.:||::|.|||..|     
  Fly  1654 FHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYL 1718

  Fly   421 -KLRDRTWTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPF----YDEQPFGIYEK 480
             |..|   :.||||:|:|||||:.:.:|:.||||:.|||:||||:|..||    .||..:.|   
  Fly  1719 DKTAD---SFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSI--- 1777

  Fly   481 ILSGKIEW-ERHMDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPP 544
              ..:|.| ..::...|..::|.||..|.|||:|:..:.|.|:..|.:|:.::|..:..::::||
  Fly  1778 --CNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPP 1840

  Fly   545 ILPDVHHDGDTKNFD 559
            ..|.|.|..||:.||
  Fly  1841 FKPQVKHPLDTQYFD 1855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 107/300 (36%)
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 105/294 (36%)
Blue background indicates that the domain is not in the aligned region.

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