DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Rps6ka5

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001382521.1 Gene:Rps6ka5 / 314384 RGDID:1308336 Length:798 Species:Rattus norvegicus


Alignment Length:391 Identity:142/391 - (36%)
Similarity:225/391 - (57%) Gaps:43/391 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 EGEGNGRDADDATHDSSESIEEDDGNE---TDDEEDDDESEESSSVQTAK---GVRKYHLDDYQI 276
            ||||.|......:.||.      ||.|   |...|          ::||.   ...|..::::::
  Rat     2 EGEGGGSGGAGTSGDSG------DGGEQLLTVKHE----------LRTANLTGHAEKVGIENFEL 50

  Fly   277 IKTVGTGTFGRVCLCRDRIS----EKYCAMKILAMTEVI-RLKQIEHVKNERNILREIRH-PFVI 335
            :|.:|||.:|:|.|.| :||    .|..|||:|....:: :.|..||.:.||.:|..||. ||::
  Rat    51 LKVLGTGAYGKVFLVR-KISGHDAGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLV 114

  Fly   336 SLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFTSQTSNFYAAEIVSALEYLHSLQIVYRDLKP 400
            :|.::.:.::.|::|.||:.||||||:|....:||......|..|||.|||:||.|.|:|||:|.
  Rat   115 TLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKL 179

  Fly   401 ENLLINRDGHLKITDFGFAKKL----RDRTWTLCGTPEYIAPEIIQ--SKGHNKAVDWWALGVLI 459
            ||:|::.:||:.:||||.:|:.    .:|.::.|||.||:||:|::  ..||:||||||:||||:
  Rat   180 ENILLDSNGHVVLTDFGLSKEFVADEAERAYSFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM 244

  Fly   460 YEMLVGYPPF----YDEQPFGIYEKILSGKIEWERHMDPIAKDLIKKLLVNDRTKRLGNMKNGAD 520
            ||:|.|..||    .......|..:||..:..:.:.|..:||||:::||:.|..||||.....|:
  Rat   245 YELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQGMSSVAKDLLQRLLMKDPKKRLGCGPRDAE 309

  Fly   521 DVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTKNF-DDYPEKD--WKPAKAVDQRDLQYFND 582
            ::|.|.:|:.:||:|:.:||:..|..|.:..:.|..|| :::.|.|  :.|| |:.|...:.|..
  Rat   310 EIKEHLFFEKINWDDLAAKKVPAPFKPVIRDELDVSNFAEEFTEMDPTYSPA-ALPQSSERLFQG 373

  Fly   583 F 583
            :
  Rat   374 Y 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 120/307 (39%)
Rps6ka5NP_001382521.1 Protein Kinases, catalytic domain 47..379 CDD:473864 127/330 (38%)
STKc_MSK1_C 417..726 CDD:271081
Blue background indicates that the domain is not in the aligned region.

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