DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Lats1

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001128015.2 Gene:Lats1 / 308265 RGDID:1564085 Length:1130 Species:Rattus norvegicus


Alignment Length:512 Identity:153/512 - (29%)
Similarity:225/512 - (43%) Gaps:114/512 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 ASSESSDPLESDYSEEDPEQEQQRPDPATNSRSSSTATTTTTSSADHDNDVDEEDEEDD------ 215
            ||....|...|...|||.|:.....|.....:...|.:..|.    ..|..|||..|..      
  Rat   576 ASKPCKDDQPSSAKEEDSEKSLDSVDSGDKEKKQITTSPITV----RKNKKDEERRESRIQSYSP 636

  Fly   216 -------ENEGEGNGRDADDATHDSSESIEEDDGNE------TDDEEDDDE----SEESSSVQTA 263
                   |...|...:......| ..:.:|    ||      :.|.:|...    .:||:.::..
  Rat   637 QAFKFFMEQHVENVLKSHQQRLH-RKKQLE----NEMMRVGLSQDAQDQMRKMLCQKESNYIRLK 696

  Fly   264 KGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISEKYCAMKILAMTEVIRLKQIEHVKNERNILRE 328
            :.  |.....:..|||:|.|.||.|||.|...::...|.|.|...:|:...|:.|||.||:||.|
  Rat   697 RA--KMDKSMFVKIKTLGIGAFGEVCLARKVDTKALYATKTLRKKDVLLRNQVAHVKAERDILAE 759

  Fly   329 IRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFTSQTSNFYAAEIVSALEYLHSLQI 393
            ..:.:|:.|.:|.:|..|||.:.||:.||::.:.|...|.|....:.||.||:..|:|.:|.:..
  Rat   760 ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPENLARFYIAELTCAVESVHKMGF 824

  Fly   394 VYRDLKPENLLINRDGHLKITDFGFAKKLRDRTWT------------------------------ 428
            ::||:||:|:||:||||:|:||||.....|   ||                              
  Rat   825 IHRDIKPDNILIDRDGHIKLTDFGLCTGFR---WTHDSKYYQSGDHPRQDSMDFSSEWGDPSNCR 886

  Fly   429 -----------------------LCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFY 470
                                   |.|||.|||||::...|:.:..|||::||:::|||||.|||.
  Rat   887 CGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILFEMLVGQPPFL 951

  Fly   471 DEQPFGIYEKILSGKIEWER--HMDPIAK------DLIKKLLVNDRTKRLGNMKNGADDVKRHRW 527
            .:.|.....|:    |.|:.  |:.|.||      |||.| |......|||  |||||::|.|.:
  Rat   952 AQTPLETQMKV----INWQTSLHIPPQAKLSPEASDLIIK-LCRGPEDRLG--KNGADEIKAHPF 1009

  Fly   528 FKHLNW-NDVYSKKLKPPILPDVHHDGDTKNFDDY-PEKDWKPAKAVDQRDLQYFND 582
            ||.::: :|:  ::.....:|.:.|..||.|||.. |:|.|.     |..:.:..||
  Rat  1010 FKTIDFSSDL--RQQSASYIPKITHPTDTSNFDPVDPDKLWS-----DGNEEENIND 1059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 120/353 (34%)
Lats1NP_001128015.2 UBA_like_SF 103..143 CDD:473871
PHA03247 <183..590 CDD:223021 4/13 (31%)
MobB_LATS1 629..704 CDD:439273 11/81 (14%)
STKc_LATS1 703..1084 CDD:270775 126/374 (34%)
Blue background indicates that the domain is not in the aligned region.

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