DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Prkacb

DIOPT Version :9

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_006233513.1 Gene:Prkacb / 293508 RGDID:1310574 Length:398 Species:Rattus norvegicus


Alignment Length:352 Identity:176/352 - (50%)
Similarity:244/352 - (69%) Gaps:11/352 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 RDADDATHDSSESIEEDDGNETDDEEDDDESEESSSVQTAKG--VRKYH--------LDDYQIIK 278
            |.:.....|...::|| :|.:..:.....:......:..||.  :||:.        |:|::..|
  Rat    32 RHSKGTAQDQKAALEE-EGLQASEHTASWDKPMKEFLAKAKEDFLRKWENPPPSNAGLEDFERKK 95

  Fly   279 TVGTGTFGRVCLCRDRISEKYCAMKILAMTEVIRLKQIEHVKNERNILREIRHPFVISLEWSTKD 343
            |:|||:||||.|.:.:.:|:|.|||||...:|::||||||..||:.||:.:..||::.||:|.||
  Rat    96 TLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVEFPFLVRLEYSFKD 160

  Fly   344 DSNLYMIFDYVCGGELFTYLRNAGKFTSQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRD 408
            :|||||:.:||.|||:|::||..|:|:...:.||||:||...||||||.::|||||||||||:..
  Rat   161 NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQ 225

  Fly   409 GHLKITDFGFAKKLRDRTWTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFYDEQ 473
            |::::|||||||:::.|||||||||||:|||||.|||:||||||||||||||||..|||||:.:|
  Rat   226 GYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 290

  Fly   474 PFGIYEKILSGKIEWERHMDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYS 538
            |..|||||:|||:.:..|.....|||::.||..|.|||.||:|||..|:|.|:||...:|..:|.
  Rat   291 PIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVSDIKTHKWFATTDWIAIYQ 355

  Fly   539 KKLKPPILPDVHHDGDTKNFDDYPEKD 565
            :|::.|.:|.....|||.|||||.|::
  Rat   356 RKVEAPFIPKFRGSGDTSNFDDYEEEE 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 PTZ00263 262..583 CDD:140289 171/314 (54%)
STKc_PRKX_like 272..563 CDD:270763 165/290 (57%)
PrkacbXP_006233513.1 PTZ00263 79..398 CDD:140289 167/304 (55%)
STKc_PKA 89..378 CDD:271111 163/288 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0616
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D277423at33208
OrthoFinder 1 1.000 - - FOG0000539
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100326
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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