DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and Prkg2

DIOPT Version :9

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_037144.1 Gene:Prkg2 / 25523 RGDID:3401 Length:762 Species:Rattus norvegicus


Alignment Length:468 Identity:157/468 - (33%)
Similarity:245/468 - (52%) Gaps:52/468 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 DPLESDYSEEDPEQEQQRPDPATNSRSSSTATTTTTSSADHDNDVDEEDEEDDENEGE-----GN 222
            |.||.:|.::.....::..:.:|....:......|.|:..||.....:..:..|..||     .:
  Rat   300 DCLEVEYYDKGDYIIREGEEGSTFFILAKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALISDD 364

  Fly   223 GRDADDATHDSSES---IEEDDGNET--------------------DDEEDDDESEESS------ 258
            .|.|:....::..:   |:.:..|:|                    |||:...:...||      
  Rat   365 VRSANIIAEENDVACLVIDRETFNQTVGTFDELQKYLEGYVATLNRDDEKRHAKRSMSSWKLSKA 429

  Fly   259 ----SVQTAKGVRKYH----LDDYQIIKTVGTGTFGRVCLCRDRISEKYCAMKILAMTEVIRLKQ 315
                .:|..:.|.::.    ..:.:||.|:|.|.||||.|.:.:......|||.:....::..||
  Rat   430 LSLEMIQLKEKVARFSSTSPFQNLEIIATLGVGGFGRVELVKVKNENIAFAMKCIRKKHIVDTKQ 494

  Fly   316 IEHVKNERNILREIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFTSQTSNFYAAE 380
            .|||.:|:.||.|:..||::.|..:.||:..:||:.:...||||::.||:.|.|...||.|..|.
  Rat   495 QEHVYSEKRILEELCSPFIVKLYRTFKDNKYVYMLLEACLGGELWSILRDRGSFDEPTSKFCVAC 559

  Fly   381 IVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKKL--RDRTWTLCGTPEYIAPEIIQS 443
            :..|.:|||.|.|:|||||||||:::.||:||:.|||||||:  ..:|||.||||||:|||:|.:
  Rat   560 VTEAFDYLHRLGIIYRDLKPENLILDADGYLKLVDFGFAKKIGSGQKTWTFCGTPEYVAPEVILN 624

  Fly   444 KGHNKAVDWWALGVLIYEMLVGYPPFYDEQPFGIYEKILSG--KIEWERHMDPIAKDLIKKLLVN 506
            |||:.:||:|:||:|:||:|.|.|||........|..||.|  |:::.|.:....:|||::|...
  Rat   625 KGHDFSVDFWSLGILVYELLTGNPPFSGIDQMMTYNLILKGIEKMDFPRKITRRPEDLIRRLCRQ 689

  Fly   507 DRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTKNFDDYPEKDWKPAKA 571
            :.|:||||:|||.:|:|:|||....||..:.::.|..|:..::....|...||.||     |.|.
  Rat   690 NPTERLGNLKNGINDIKKHRWLNGFNWEGLKARSLPSPLRRELSGPIDHSYFDKYP-----PEKG 749

  Fly   572 VDQRDLQ-YFNDF 583
            |...::. :..||
  Rat   750 VPPDEMSGWDKDF 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 PTZ00263 262..583 CDD:140289 132/329 (40%)
STKc_PRKX_like 272..563 CDD:270763 127/294 (43%)
Prkg2NP_037144.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..138
Crp 162..>285 CDD:223736
cGMP-binding, high affinity, cAMP-binding, moderate affinity. /evidence=ECO:0000250|UniProtKB:Q13237 168..283
CAP_ED 168..273 CDD:237999
cGMP-binding, high affinity, cAMP-binding, low affinity. /evidence=ECO:0000250|UniProtKB:Q13237 286..416 20/115 (17%)
CAP_ED 286..401 CDD:237999 17/100 (17%)
PTZ00263 417..752 CDD:140289 135/339 (40%)
STKc_cGK 459..718 CDD:270724 118/258 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 740..762 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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