DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and pdk-1

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001024743.1 Gene:pdk-1 / 180475 WormBaseID:WBGene00003965 Length:636 Species:Caenorhabditis elegans


Alignment Length:412 Identity:103/412 - (25%)
Similarity:186/412 - (45%) Gaps:93/412 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 SSTATTTTTSSADHDNDVDEEDEEDDENEGEGNGRDADDATHDSSESIEEDDGNETDDEEDDDES 254
            ::|:..|||::.|..:|                 |:|...|.:.:.:.              .||
 Worm     7 TNTSLDTTTTNNDTTSD-----------------REAAPTTLNLTPTA--------------SES 40

  Fly   255 EESSSVQTA---------KGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISEKYCAMKILAMTEV 310
            |.|.|..||         :|..|...:|:..::::|.|.:.:|..||:..::...|:|:|..:.:
 Worm    41 ENSLSPVTAEDLIAKSIKEGCPKRTSNDFMFLQSMGEGAYSQVFRCREVATDAMFAVKVLQKSYL 105

  Fly   311 IRLKQIEHVKNERNILREIR-----HPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFT 370
            .|.::::.:..|:|||..:.     ||||..|.....|.:.:|.:...|..|:|...|.:.|.|.
 Worm   106 NRHQKMDAIIREKNILTYLSQECGGHPFVTQLYTHFHDQARIYFVIGLVENGDLGESLCHFGSFD 170

  Fly   371 SQTSNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKKL------------- 422
            ..||.|:|:||::.|::||..:||:||:||:|:||.:|||:.|||||.|:..             
 Worm   171 MLTSKFFASEILTGLQFLHDNKIVHRDMKPDNVLIQKDGHILITDFGSAQAFGGLQLSQEGFTDA 235

  Fly   423 ----------------------------RDRTWTLCGTPEYIAPEIIQSKGHNKAVDWWALGVLI 459
                                        ..|..|..||..|::||::.........|.|.||.::
 Worm   236 NQASSRSSDSGSPPPTRFYSDEEVPEENTARRTTFVGTALYVSPEMLADGDVGPQTDIWGLGCIL 300

  Fly   460 YEMLVGYPPFYDEQPFGIYEKILSGKIEWERHMDPIAKDLIKKLLVNDRTKRLGNMKNGADDVKR 524
            ::.|.|.|||.....:.:.::|......:.......|.::|.|:||.|.:.|:     .:.::..
 Worm   301 FQCLAGQPPFRAVNQYHLLKRIQELDFSFPEGFPEEASEIIAKILVRDPSTRI-----TSQELMA 360

  Fly   525 HRWFKHLNWNDVYSKKLKPPIL 546
            |::|::::|.::  ..:|||:|
 Worm   361 HKFFENVDWVNI--ANIKPPVL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 85/321 (26%)
pdk-1NP_001024743.1 STKc_PDK1 67..364 CDD:270733 79/301 (26%)
PH_PDK1 464..570 CDD:241293
Blue background indicates that the domain is not in the aligned region.

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