DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pka-C3 and prkcq

DIOPT Version :10

Sequence 1:NP_730083.2 Gene:Pka-C3 / 39733 FlyBaseID:FBgn0000489 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_012813823.2 Gene:prkcq / 100038268 XenbaseID:XB-GENE-487643 Length:699 Species:Xenopus tropicalis


Alignment Length:350 Identity:121/350 - (34%)
Similarity:199/350 - (56%) Gaps:25/350 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 EEDDDESE---ESSSVQTAKGVRKYHLDDYQIIKTVGTGTFGRVCLCRDRISEKYCAMKILAMTE 309
            :|...|.|   |.||.|.     |....|:.:.|.:|.|:||:|.|...:.:.::.|:|:|....
 Frog   349 QESPPEPELKIEQSSCQI-----KVTFSDFVLHKMLGKGSFGKVFLAELKRTNQFFAIKVLKKDV 408

  Fly   310 VIRLKQIEHVKNERNILR-EIRHPFVISLEWSTKDDSNLYMIFDYVCGGELFTYLRNAGKFTSQT 373
            |:....:|....|:.:|. ...|||:..|..:.:...:|:.:.:|:.||:|..::::..||....
 Frog   409 VLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKEHLFFVMEYLNGGDLMFHIQSCHKFDLPR 473

  Fly   374 SNFYAAEIVSALEYLHSLQIVYRDLKPENLLINRDGHLKITDFGFAKK--LRD-RTWTLCGTPEY 435
            :.|||||||..|::|||..:||||||.:|:|::.:||:||.|||..|:  |.| :|.|.||||:|
 Frog   474 ATFYAAEIVCGLQFLHSKGVVYRDLKLDNILLDMEGHIKIADFGMCKESMLGDAKTSTFCGTPDY 538

  Fly   436 IAPEIIQSKGHNKAVDWWALGVLIYEMLVGYPPFY--DEQPFGIYEKILSGKIEWERHMDPIAKD 498
            |||||:..:.:|.:||||:.|||:||||:|..||:  ||:.  :::.|......:.|.:...|||
 Frog   539 IAPEILLGQKYNYSVDWWSFGVLLYEMLIGQSPFHGIDEEE--LFQSIRMDNPMYPRFLSMEAKD 601

  Fly   499 LIKKLLVNDRTKRLGNMKNGADDVKRHRWFKHLNWNDVYSKKLKPPILPDVHHDGDTKNFD---- 559
            ::..|.|.:..:||| :|.   |:::|.:|:|::|..:.:::::||..|.|....|..|||    
 Frog   602 ILIMLFVREPERRLG-VKG---DIRQHCFFQHIDWGRLENREIEPPFKPKVKSADDWSNFDKEFL 662

  Fly   560 -DYPEKDWKPAKAVDQRDLQYFNDF 583
             :.|.........::..|...||:|
 Frog   663 NEKPRLSSSERTLINSMDQNMFNNF 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pka-C3NP_730083.2 STKc_PRKX_like 272..563 CDD:270763 108/301 (36%)
prkcqXP_012813823.2 C1_nPKC_theta-like_rpt1 150..210 CDD:410384
C1_nPKC_theta-like_rpt2 229..278 CDD:410387
STKc_nPKC_theta 367..697 CDD:270770 113/326 (35%)
Blue background indicates that the domain is not in the aligned region.

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