DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and SNF1

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_010765.3 Gene:SNF1 / 852088 SGDID:S000002885 Length:633 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:178/503 - (35%)
Similarity:282/503 - (56%) Gaps:89/503 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLM-KVEREIAIMKLIDHPHVL 78
            :|.|::.||||:|..|.|||..|...|:|||:||||::.|::|.:. ::||||:.::|:.|||::
Yeast    52 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 116

  Fly    79 GLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 143
            .|.||.::|..:.:::|: :|.|||||:|::.:::.:|||:||:|||||:::||.|.|.||||||
Yeast   117 KLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKP 180

  Fly   144 ENLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILYAL 208
            |||||||..|:||||||::::...|:.|:||||||:||.||||.|:.|.|.:.||||||||||.:
Yeast   181 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVM 245

  Fly   209 LVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPWVTAGG 273
            |...|||||:::..|.:.:..||:.:|.|:.|....|::.|:.|||..|:::.||.:..|     
Yeast   246 LCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW----- 305

  Fly   274 KGELELELP---MMEVVQTH--------------VIPTATAVDPDVLNAICSLGCFKEKEKLIQE 321
               .:::||   :...::.|              ..|....:|.:::|.:.|...:::.|  |.|
Yeast   306 ---FKVDLPEYLLPPDLKPHPEEENENNDSKKDGSSPDNDEIDDNLVNILSSTMGYEKDE--IYE 365

  Fly   322 LLSSSHNTE-----KVIYFLLLERKRRRPALEDDDEIAQKSRSELDAVDPPRKRLDTCRINGTNA 381
            .|.||.:|.     :..|.|:.|.|    :|..|.: |.||.|:         .|||.       
Yeast   366 SLESSEDTPAFNEIRDAYMLIKENK----SLIKDMK-ANKSVSD---------ELDTF------- 409

  Fly   382 PSYGQISEGSPLTPRRQAFNFRS---YSSTRNHQRRSPTTVTSSVRSSSYH-SP----------T 432
                 :|:..|...::...:.:|   :.:.:.|.||..:.:|   :..:|| ||          |
Yeast   410 -----LSQSPPTFQQQSKSHQKSQVDHETAKQHARRMASAIT---QQRTYHQSPFMDQYKEEDST 466

  Fly   433 RCNSPMSSAQ-QQANAISRPSSPAAG------TRHST----YGDRDRS 469
            ....|.|..| .:||.::: .||||.      |:.|.    :|.|.||
Yeast   467 VSILPTSLPQIHRANMLAQ-GSPAASKISPLVTKKSKTRWHFGIRSRS 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 123/253 (49%)
S_TKc 18..269 CDD:214567 122/251 (49%)
UBA_BRSK 298..350 CDD:270525 15/56 (27%)
SNF1NP_010765.3 STKc_AMPK_alpha 52..306 CDD:270981 124/262 (47%)
UBA_2 344..389 CDD:400760 12/46 (26%)
AdenylateSensor 504..626 CDD:406881 4/10 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100252
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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