DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sff and CIPK26

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_850861.2 Gene:CIPK26 / 832246 AraportID:AT5G21326 Length:439 Species:Arabidopsis thaliana


Alignment Length:402 Identity:149/402 - (37%)
Similarity:230/402 - (57%) Gaps:44/402 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREK-LSESVLMKVEREIAIMKLIDHPHVL 78
            ||.|.:.||||:|....|:..|:...|::||:||:::|| |...:..::.|||..||||:||:|:
plant    10 VGKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICTMKLINHPNVV 74

  Fly    79 GLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 143
            .|.:|..:|..:|::||..:||||||.:|..|||..:.|||:|:|:|:|:|:|||..:.||||||
plant    75 RLYEVLASKTKIYIVLEFGTGGELFDKIVHDGRLKEENARKYFQQLINAVDYCHSRGVYHRDLKP 139

  Fly   144 ENLLLDEKNNIKIADFGMASL--QPAG-SMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVIL 205
            ||||||.:.|:|::|||:::|  |..| .:|.|:||:|:||.|||:..:.|||..||:|||||||
plant   140 ENLLLDAQGNLKVSDFGLSALSRQVRGDGLLHTACGTPNYAAPEVLNDQGYDGATADLWSCGVIL 204

  Fly   206 YALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPWVT 270
            :.||.|.|||:|.||..|.:|:..|.:|.|.::.|..::|:..:::.||..|:|:.|:....|..
plant   205 FVLLAGYLPFEDSNLMTLYKKIIAGEYHCPPWLSPGAKNLIVRILDPNPMTRITIPEVLGDAWFK 269

  Fly   271 AGGKGEL-----ELELPMMEVV----QTHVIPTATAVDPDVLNAI--------CSLG-CFKEKE- 316
            ...|..:     |..|..::.|    :.|.:.......|..:||.        ..|| .|:|:| 
plant   270 KNYKPAVFEEKEEANLDDVDAVFKDSEEHHVTEKKEEQPTSMNAFELISMSRALDLGNLFEEEEG 334

  Fly   317 --------------KLIQELLSSS----HNTEKVIYFLLLER--KRRRPALEDDDEIAQKSRSEL 361
                          .|:|::..:|    .:.:|..|.:.||.  ..|:..|....||.|.|.| |
plant   335 FKRETRFAAKGAANDLVQKIEEASKPLGFDIQKKNYKMRLENVTAGRKGNLRVATEIFQVSPS-L 398

  Fly   362 DAVDPPRKRLDT 373
            ..::..:.:.||
plant   399 HMIEVRKTKGDT 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 117/256 (46%)
UBA_BRSK 298..350 CDD:270525 17/81 (21%)
CIPK26NP_850861.2 STKc_SnRK3 12..267 CDD:271133 116/254 (46%)
CIPK_C 312..426 CDD:213380 24/100 (24%)

Return to query results.
Submit another query.