DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and AT5G21222

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_850859.2 Gene:AT5G21222 / 832244 AraportID:AT5G21222 Length:831 Species:Arabidopsis thaliana


Alignment Length:431 Identity:142/431 - (32%)
Similarity:232/431 - (53%) Gaps:43/431 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QFVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREK-LSESVLMKVEREIAIMKLIDHPH 76
            ::||.|.:.:.:|:...|.::..|....|..||:.|::::| |...:..:::|||:|||||:||:
plant     8 RWVGKYEVGRLIGECNFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISIMKLINHPN 72

  Fly    77 VLGLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDL 141
            |:.|.:|..:|..:|::||.:|||:|||.:...||:...||:::|:|:|:|:|:|||..:.||||
plant    73 VVQLYEVLASKAKIYIVLEFISGGKLFDKIKNDGRMNEDEAQRYFQQLINAVDYCHSRGVYHRDL 137

  Fly   142 KPENLLLDEKNNIKIADFGMASL-QPAG--SMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGV 203
            ||||||||.:.|:|:|:||:.:| |.||  .:..|:||:|.||.|||:..:.|||.|||:|||||
plant   138 KPENLLLDAQENLKVAEFGLIALSQQAGGDGLRHTACGNPDYAAPEVLNDQGYDGAKADLWSCGV 202

  Fly   204 ILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPW 268
            ||:.||.|.|||:|.:|..|.:|:....|..|.::....::|:..:::.||..|:|:.||....|
plant   203 ILFVLLAGYLPFEDSSLTTLYKKISSADFSCPPWLSSGVKNLIVRILDPNPMTRITIPEILEDVW 267

  Fly   269 VTAGGKGEL-----ELELPMMEV---------VQTHVIPT------ATAVD----PDVLNAICSL 309
            .....|..:     |..|..:|.         ||....|.      .|..|    ..::|.:...
plant   268 FKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIER 332

  Fly   310 GCFKEKEKLIQELLSSSHNTEKVIYFLL---LERKRRRPALEDDDEIAQKSRSELDAVDPPRKRL 371
            |..:|...:...|:...|....:.|..|   |.|::...:|     ::..|:.|.:.:.|     
plant   333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL-----LSLISKVEKNGLKP----- 387

  Fly   372 DTCRING-TNAPS-YGQISEGSPLTPRRQAFNFRSYSSTRN 410
            ||...|. .||.| .|.:.:...:..:.:....:..:||.|
plant   388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 108/256 (42%)
UBA_BRSK 298..350 CDD:270525 11/58 (19%)
AT5G21222NP_850859.2 Protein Kinases, catalytic domain 12..267 CDD:473864 107/254 (42%)
PPR_2 318..364 CDD:463778 8/45 (18%)
PPR repeat 321..348 CDD:276811 4/26 (15%)
PLN03218 <342..>740 CDD:215636 20/97 (21%)
PPR repeat 356..383 CDD:276811 7/31 (23%)
PPR repeat 389..418 CDD:276811 6/28 (21%)
PPR repeat 424..453 CDD:276811 3/5 (60%)
PPR repeat 460..489 CDD:276811
PPR repeat 502..525 CDD:276811
PPR_2 529..576 CDD:463778
PPR repeat 533..560 CDD:276811
PPR repeat 566..595 CDD:276811
PPR repeat 601..629 CDD:276811
PPR repeat 636..665 CDD:276811
PPR repeat 671..697 CDD:276811
PPR repeat 707..736 CDD:276811
Blue background indicates that the domain is not in the aligned region.

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