DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sff and CIPK3

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_850095.2 Gene:CIPK3 / 817240 AraportID:AT2G26980 Length:451 Species:Arabidopsis thaliana


Alignment Length:348 Identity:132/348 - (37%)
Similarity:200/348 - (57%) Gaps:40/348 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREK-LSESVLMKVEREIAIMKLIDHPHVL 78
            ||.|.:.:|:|:|....||...:...|:.||:||:::|| |...:..::.||||.||||.||:|:
plant    21 VGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKLIKHPNVV 85

  Fly    79 GLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 143
            .|.:|..:|..:::|||:|:||||||.:|..||:...|||::|:|:|.|:|:|||..:.||||||
plant    86 QLYEVMASKTKIFIILEYVTGGELFDKIVNDGRMKEDEARRYFQQLIHAVDYCHSRGVYHRDLKP 150

  Fly   144 ENLLLDEKNNIKIADFGMASLQPA---GSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVIL 205
            ||||||...|:||:|||:::|...   ..:|.||||:|:|..|||:....|||..||:|||||:|
plant   151 ENLLLDSYGNLKISDFGLSALSQQVRDDGLLHTSCGTPNYVAPEVLNDRGYDGATADMWSCGVVL 215

  Fly   206 YALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPWVT 270
            |.||.|.|||||.||..|.:|:..|.|:.|.::......|:..:::.||..|:|..|:....|. 
plant   216 YVLLAGYLPFDDSNLMNLYKKISSGEFNCPPWLSLGAMKLITRILDPNPMTRVTPQEVFEDEWF- 279

  Fly   271 AGGKGELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGCFKEKEKLIQELLSSSHNTEKVIYF 335
                 :.:.:.|:.|        .....:.|.::|:     ||:.|:                 .
plant   280 -----KKDYKPPVFE--------ERDDSNMDDIDAV-----FKDSEE-----------------H 309

  Fly   336 LLLERKRRRPALEDDDEIAQKSR 358
            |:.|::..:||..:..||...||
plant   310 LVTEKREEQPAAINAFEIISMSR 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 115/256 (45%)
UBA_BRSK 298..350 CDD:270525 9/51 (18%)
CIPK3NP_850095.2 STKc_SnRK3 23..278 CDD:271133 114/254 (45%)
CIPK_C 323..432 CDD:213380 4/10 (40%)

Return to query results.
Submit another query.