DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and pimr158

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_017214431.1 Gene:pimr158 / 798902 ZFINID:ZDB-GENE-081028-9 Length:508 Species:Danio rerio


Alignment Length:273 Identity:73/273 - (26%)
Similarity:126/273 - (46%) Gaps:41/273 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YRLEKTLGKGQTGLVKLGVHCVIGKKVAIKII----NREKLSESVLMKVEREIAIMKLIDH---- 74
            |:|.|.||:|..|.|..|:....|.:||:|.:    |.:.:|.|....:..||.:..:...    
Zfish   250 YKLGKQLGEGGFGSVYEGIRIQDGLQVAVKFVQKTPNMQDVSSSCDQPLPLEITLANMASGGSRC 314

  Fly    75 PHVLGLSD--VYENKKYLYLILEHVSGG-ELFDYL-VKKGRLTPKEARKFFRQIISALDFCHSHS 135
            .:::.|.|  |:||  :..:::|..|.. :|..:| |..|.|:.|.|....||.:.|.:.|....
Zfish   315 ANIIQLLDWQVFEN--HYVMVMERPSPSMDLEAFLEVSGGVLSEKTAHTIMRQAVYAANVCCYRG 377

  Fly   136 ICHRDLKPENLLLD-EKNNIKIADFGMASLQPAGSMLETS----CGSPHYACPEVIRGEKYDGRK 195
            :.|||:|.:|||:: :...:|:.|||....     |:|::    .|:..|..||......|..:.
Zfish   378 VFHRDIKLQNLLVNPDTLEVKLIDFGCGDF-----MMESAYSLFSGTEAYIPPEFYEKGCYRAKP 437

  Fly   196 ADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIPH-----FVPPDCQSLLRGMIEVNPD 255
            |.|:|.||:|:.:|.|..|...|            ::::.|     .:..:|..::...:..||:
Zfish   438 ATVYSLGVLLFTMLHGEFPSAYD------------LYYLQHDWSKFTLSQECCDMMTACLHENPE 490

  Fly   256 RRLTLAEINRHPW 268
            .|:.|.|:..|.|
Zfish   491 CRIPLEEMPYHDW 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 73/273 (27%)
S_TKc 18..269 CDD:214567 73/273 (27%)
UBA_BRSK 298..350 CDD:270525
pimr158XP_017214431.1 DNA_pol3_delta2 <119..>238 CDD:331068
PKc_like 249..503 CDD:328722 72/271 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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