DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and nim1kb

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_001337548.3 Gene:nim1kb / 797096 ZFINID:ZDB-GENE-091204-283 Length:433 Species:Danio rerio


Alignment Length:392 Identity:125/392 - (31%)
Similarity:198/392 - (50%) Gaps:37/392 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQKENNVTAENC--QFVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVE 63
            |.|:.|...|..  :.||.|::...:|.|....|||..|.:...|||:||:::.:|.......:.
Zfish    50 MCKDENTVKELTVGKRVGFYKVRGQIGCGNFSKVKLATHALTKDKVAVKIMDKMRLDVQTQRMLT 114

  Fly    64 REIAIMKLIDHPHVLGLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISAL 128
            |||:.|:.:.||::|.|.:|.|....||||||...||:|...:...|:||..|::..|.||:||:
Zfish   115 REISNMESLYHPNLLQLFEVLETPSRLYLILEFAGGGDLHTRISSGGKLTDLESKIVFAQILSAV 179

  Fly   129 DFCHSHSICHRDLKPENLLLDEKNNIKIADFGMAS-LQPAGSMLETSCGSPHYACPEVIRGEKYD 192
            .:.|.::|.|||||.||:|......||:||||.:: :......|:|.||||.||.||:.:.:.|.
Zfish   180 KYMHENNIIHRDLKAENVLYTTNGCIKVADFGFSTKVNNRNQALDTFCGSPPYAAPELFKDDSYI 244

  Fly   193 GRKADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRR 257
            |...|||:.||:|:.::.|:|||..|.:.:|.:.|..|.:.:|.:|...||.|:||:::..|..|
Zfish   245 GPPVDVWAMGVLLFFMVTGSLPFRADTVPKLRQSVLEGAYVLPIWVSAPCQRLIRGILKPEPSER 309

  Fly   258 LTLAEINRHPWVTAGGKGELELEL-----PMMEVVQTHVIPTATA-VDPD---VLNAICSLGCFK 313
            ..|.::....|:       |.:||     |:.::...|::..... :|.|   |...:..||...
Zfish   310 CALDQMLGCEWL-------LPVELFRPIPPLYQLNPIHLLEAGPGELDRDQEEVKGILEKLGVTP 367

  Fly   314 E-----KEKLIQELLSSSHNTEKVIYFLLLERKRRRPALEDDDEIAQKSRSELDAVDPPRKRLDT 373
            |     :.|.|:..::.       :|.:||.|.:|....|....|:...:      ||.|..|..
Zfish   368 EHILNNQGKRIRSPING-------VYRILLHRVKRNRGAESVPSISGVVK------DPKRDSLRA 419

  Fly   374 CR 375
            .|
Zfish   420 YR 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 94/253 (37%)
S_TKc 18..269 CDD:214567 93/251 (37%)
UBA_BRSK 298..350 CDD:270525 14/59 (24%)
nim1kbXP_001337548.3 STKc_NIM1 66..321 CDD:270977 95/254 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590373
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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