DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and Sik3

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_001258145.2 Gene:Sik3 / 684112 RGDID:1593938 Length:1369 Species:Rattus norvegicus


Alignment Length:820 Identity:228/820 - (27%)
Similarity:359/820 - (43%) Gaps:182/820 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLIDHPHVLG 79
            :|.|.:::|:|||...:||...|.|...|||||||::.:|.|..|.|:.||:.|||::.|||::.
  Rat    63 IGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQLDEENLKKIFREVQIMKMLCHPHIIR 127

  Fly    80 LSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPE 144
            |..|.|.::.:||:.|:.||||:||:||..||:..||||:.|:||::|:.|||..:|.|||||.|
  Rat   128 LYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAE 192

  Fly   145 NLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILYALL 209
            |||||...||||||||.::|...|.:|:|.||||.||.||:..|::|||.|.|:||.||:||.|:
  Rat   193 NLLLDANLNIKIADFGFSNLFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLV 257

  Fly   210 VGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPWVTAGGK 274
            .||||||...|:.|..:|..|.|.||.|:..:|:.|:|.|:.::|::||::.:|.||.|:.. |.
  Rat   258 CGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPNKRLSMEQICRHRWMKL-GD 321

  Fly   275 GELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGCFKEKEKLIQELLSSSHNTEKVIYFLLLE 339
            .:...|..:.|..|......|..::.:||.|:..:|.  :||:.:|.|.|.:::....||.||.:
  Rat   322 ADPNFERLIAECQQLKEERQAEPLNDEVLLAMEDMGL--DKERTLQSLRSDAYDHYSAIYSLLCD 384

  Fly   340 RKRRRPALEDDDEIAQKSRSELDAVDPPRKRLDTCRINGTNAPSYGQISEGSPLTPRRQAFNFRS 404
            |.::                                 |.|..|.      ..|.||  ||..|::
  Rat   385 RHKK---------------------------------NKTLRPG------ALPSTP--QAMTFQA 408

  Fly   405 YSSTRNHQRRSPTTVTSSVRSSSYHSP-TRCNSPMSSAQQQANAISRPSSPAAGTRHSTYGDRDR 468
            ..:.:..|  :.|.:..||......:| .:...|..:....::....| ||.|..|:        
  Rat   409 PVNIQAEQ--TGTAMNISVPQVQLINPENQIIEPDGAVNLDSDEGEEP-SPEALVRY-------- 462

  Fly   469 SGHHSSVSRTPSHSSQKSIEGDVVVVREPRIERRDSLRQERGGGSPRDRGDCGIPPGSPGGN-SS 532
                            .|:....|.|.:||.|..|.:::              :.||.||.| .:
  Rat   463 ----------------LSMRRHTVGVADPRTEVMDEMQK--------------LLPGFPGANPQT 497

  Fly   533 GSTSASPSVHHRANSGPTIAI----------SMFHDPDSNSVVNPNGSPMMNNSSPG-------- 579
            .....:|:::...|..|..::          .....|.:..::|..| |:...:|.|        
  Rat   498 PFLQVAPNMNFMHNLLPMQSLQPTGQLEYKEQSLLQPPTLQLLNGMG-PLGRRASDGGANIQLHA 561

  Fly   580 ----------------MPGSPCNTPGGQLWKTRLTNIKNSFLGSP-----------RFHRRKMQV 617
                            .|..|..||..:          .|..|.|           |..|..:.:
  Rat   562 QQLLKRPRGPSPLVTMTPAVPAVTPVDE----------ESSDGEPDQEAVQRYLANRSKRHTLAM 616

  Fly   618 SADEVHLTPESSPELTKRS-----WFGNLITTEKDETFTILVKGKPIATVKAHL-IHAFLSMAEL 676
            ::....:.|:...:|.::|     |..:|:..:...|:      |...|:  || ...|..:...
  Rat   617 TSPTAEIPPDLQRQLGQQSFRSRVWPPHLVPDQHRSTY------KDSNTL--HLPTERFSPVRRF 673

  Fly   677 SHSVVSPTSFRVEYKRNGNGPVMFQRHVKFQVDISAICKQ------GDIADMLFALTFT--LLSG 733
            |....|..:|:...:|.||...:.|        :...|:|      |.:.:.....|..  :|..
  Rat   674 SDGAASIQAFKAHLERMGNSSSIKQ--------LQQECEQLQKMYGGQVDERTLEKTQQQHMLYQ 730

  Fly   734 NIRRFRRICEHIQSQVCSKRFPGPSSPPTVTSVTQAVSES 773
            ..:..:.:.:.||..:|    |...|||     .||..|:
  Rat   731 QEQHHQILQQQIQDSIC----PPQPSPP-----LQAACEN 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 125/252 (50%)
UBA_BRSK 298..350 CDD:270525 14/51 (27%)
Sik3NP_001258145.2 STKc_SIK 65..317 CDD:270973 124/251 (49%)
UBA_like_SF 346..390 CDD:473871 14/78 (18%)

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