DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and mark2

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_012808991.1 Gene:mark2 / 594939 XenbaseID:XB-GENE-876451 Length:792 Species:Xenopus tropicalis


Alignment Length:824 Identity:250/824 - (30%)
Similarity:379/824 - (45%) Gaps:169/824 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TAENCQFVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLI 72
            ||:....:|.|||.||:|||....|||..|.:.||:||:|||::.:|:.|.|.|:.||:.|||::
 Frog    54 TADEQPHIGNYRLLKTIGKGNFAKVKLARHVLTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL 118

  Fly    73 DHPHVLGLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSIC 137
            :||:::.|.:|.|.:|.|||::|:.||||:|||||..||:..||||..||||:||:.:||...|.
 Frog   119 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKLIV 183

  Fly   138 HRDLKPENLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCG 202
            |||||.||||||...||||||||.::....|:.|:|.||||.||.||:.:|:||||.:.||||.|
 Frog   184 HRDLKAENLLLDSDMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 248

  Fly   203 VILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHP 267
            ||||.|:.|:||||..||::|.|:|.||.:.||.::..||::||:..:.:||.:|.||.:|.|..
 Frog   249 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPAKRGTLEQIMRDR 313

  Fly   268 WVTAGGKGELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGCFKEKEKLIQELLSSSHNTEKV 332
            |:..|.: |.||: |.:|       |.....||.....:.::|  ..:|::...|::..:| |.:
 Frog   314 WMNVGHE-EDELK-PYVE-------PIPDYKDPKRTELMITMG--YTREEISDSLVNQKYN-EVM 366

  Fly   333 IYFLLLERKRRRPALEDDDEIAQKSRSELD-----------------AVDPPRKRL-DTCRINGT 379
            ..:|||..|...   .|:|.:..|.|...|                 :.:|.::|| |.......
 Frog   367 ATYLLLGYKSSE---TDNDNLTLKPRPPPDVTNSIAPSPAHKVQRSVSANPKQRRLSDQAGPAIP 428

  Fly   380 NAPSYGQISEGSPLTPRR----QAFNFRSYSSTR---------NHQRRSPTTVTSSVRSSSYHSP 431
            |:.||.:.::.:....||    :....:|.|:.|         :.::.:||..|:||.|:..:..
 Frog   429 NSNSYSKKTQSNNAENRRSEDDKESGRKSSSTVRVPPSPLSGLDRKKTTPTPSTNSVLSTGTNRS 493

  Fly   432 TRCNSPM--------SSAQQQANAISRPSSPAAGTRHSTYGDRDRSGHHSSVSRTPSHSSQ--KS 486
            .  ||||        .|.|...::.|.|.|.|:.........|.|. |..|:| |..|.|:  .|
 Frog   494 R--NSPMLDRASLVPGSVQNGKDSFSTPGSRASTASAPATSARIRQ-HQKSMS-TSVHPSKPAPS 554

  Fly   487 IEGDV-----------VVVREPRIERRDSLRQE-----RGGGS-----------PRDRGDCG--- 521
            ::|:.           |.|..|......|...|     ||..|           .||:.:.|   
 Frog   555 LDGNCEVQRPSTAPQRVPVASPSAHNISSAATERTNFPRGVSSRSTFHAGQVRQARDQQNLGFGS 619

  Fly   522 IPPGSPGGNSSGSTSASPSVHHRANSGPTIAISMFHDPDSNSVVNPNGSPMMNNSSPGMPGSPCN 586
            :.|.||.|||.|...|:.|:..:..|               ..|..|.|......:|       |
 Frog   620 VSPASPSGNSQGRRGATGSIFSKFTS---------------KFVRRNLSFRFPRRNP-------N 662

  Fly   587 TPGGQLWKTRLTNIKNSFLGSPRFHRRKMQVSADEVHLT-----------PESSPELTKRSWFGN 640
            .|.|                       |.:|.:...|||           .:|.|...:.:|  :
 Frog   663 EPEG-----------------------KDRVESTRPHLTVLDKEKDKEDHRDSKPRSLRFTW--S 702

  Fly   641 LITTEKDETFTILVKGKPIATVKAHLIHAFLSMAELSHSVVSPTSFRVEYKRNGNGPVMFQRHVK 705
            :.||...|...::.:           |...|......|...........:...|:     ..:|:
 Frog   703 MKTTSSMEPNEMMSE-----------IRKVLDANNCQHESQEKYMLLCVHGTPGH-----DNYVQ 751

  Fly   706 FQVDISAICKQGDIADMLFALTFTLLSGNIRRFRRICEHIQSQV 749
            ::::   :||...::  |..:.|..:||....|:.|...|.:::
 Frog   752 WEME---VCKLPRLS--LNGVRFKRISGTSIAFKNIASKIANEL 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 133/252 (53%)
UBA_BRSK 298..350 CDD:270525 11/51 (22%)
mark2XP_012808991.1 STKc_MARK 63..315 CDD:270974 132/251 (53%)
UBA_MARK2 333..374 CDD:270589 10/43 (23%)
MARK2_C 693..791 CDD:213386 19/121 (16%)

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