DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sff and mark4a

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_021332218.1 Gene:mark4a / 569346 ZFINID:ZDB-GENE-060531-156 Length:762 Species:Danio rerio


Alignment Length:673 Identity:222/673 - (32%)
Similarity:327/673 - (48%) Gaps:129/673 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QKENNVTAEN----CQ-----------FVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINR 51
            :|..||::.:    |:           .:|.|||.||:|||....|||..|.:.||:||||||::
Zfish    27 EKGTNVSSRSLGARCRNSMASYSDELPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAIKIIDK 91

  Fly    52 EKLSESVLMKVEREIAIMKLIDHPHVLGLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKE 116
            .:|:.:.|.|:.||:.|||.:.||:::.|.:|.|.:|.|||::|:.||||:|||||..||:...|
Zfish    92 TQLNPTSLQKLFREVRIMKTLHHPNIVQLFEVIETEKTLYLVMEYASGGEVFDYLVSHGRMKEIE 156

  Fly   117 ARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYA 181
            ||..||||:||:.:||..:|.|||||.||||||..:||||||||.::....|:.|:|.||||.||
Zfish   157 ARAKFRQIVSAVHYCHQKNIVHRDLKAENLLLDADSNIKIADFGFSNEFTLGNKLDTFCGSPPYA 221

  Fly   182 CPEVIRGEKYDGRKADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLL 246
            .||:.:|:||||.:.|:||.|||||.|:.|:||||..||::|.|:|.||.:.:|.::..||:.:|
Zfish   222 APELFQGKKYDGPEVDIWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYMSTDCEGIL 286

  Fly   247 RGMIEVNPDRRLTLAEINRHPWVTAGGKGELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGC 311
            |..:.:||.:|.||.::.:..|:.||..|:   ||      :.|:.||....|.:.:..:..:|.
Zfish   287 RRFLVLNPSKRCTLEQVMKDKWMNAGHDGD---EL------KPHIEPTEDYSDANRIEIMVGMGF 342

  Fly   312 FKEKEKLIQELLSSSHNTEKVIYFLLLERKRRRPALEDDDEIAQKSRSELDAVDPPRKRLDTCRI 376
            ..|:.|  ..||:..:|.....|.||        .|:.:|....:....:..   ||.|.... .
Zfish   343 TTEEIK--DSLLNQKYNEVTATYLLL--------GLKTEDGAESRVSGSMTL---PRVRPSPI-T 393

  Fly   377 NGTNAPSYGQISEGSPLTPRRQAFNFRSYSSTRNHQ----------------RRSPTT------- 418
            ||||..|....|..|..:..:::.:  :|...|.|.                :||||:       
Zfish   394 NGTNKHSSSSSSSSSSHSKTQRSAS--TYHRQRRHSDFFCSAGGPSMPVMHPKRSPTSGGDRELR 456

  Fly   419 -------------------VTSSVRSSSYHSPTRCNSPMSSAQQQANAISRPSSPAAGTRHSTYG 464
                               ..||...|:.::|.:...|....:..|...:.|.|..  ||.:||.
Zfish   457 ESRMPPRKASCSVMGSRTLPPSSPMVSTANNPNKAEIPDRRKEMTATTNNIPGSTM--TRRNTYV 519

  Fly   465 DRDRSG-----------HHSSVS-RTPSHS-----------SQKSIEGDVVVVREPRIERRDSLR 506
            ..|||.           .:||:| |.|..|           |..|..|:     ..|:.|..::|
Zfish   520 CTDRSSTDRHSLLQNGKDNSSLSHRLPPTSPSTLSIVGAGASSSSSSGE-----RCRLTRGSTIR 579

  Fly   507 QERGGGSPRDRGDCGIPPGSPGGNSSGSTSASPSVHHRANSGPTIAISMFHDPDSN--SVVNPNG 569
            ....||..|||    :||      :.|....||::.|.|.:.|..|.|.   ..||  |.:....
Zfish   580 STFHGGQLRDR----VPP------TYGPPPTSPTLSHDAGALPANARSR---ATSNLFSKLTSKL 631

  Fly   570 SPMMNNSSPGMPGSPCNTPGGQL 592
            :..::|.|.|:  |..:..||.|
Zfish   632 TRRVSNESEGV--SRSSVTGGHL 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 128/252 (51%)
UBA_BRSK 298..350 CDD:270525 11/51 (22%)
mark4aXP_021332218.1 STKc_MARK 57..309 CDD:270974 127/251 (51%)
UBA_MARK3_4 327..369 CDD:270590 10/51 (20%)
MARK4_C 662..762 CDD:213382
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.