DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and mark2a

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_009293774.1 Gene:mark2a / 562231 ZFINID:ZDB-GENE-030131-4145 Length:782 Species:Danio rerio


Alignment Length:837 Identity:250/837 - (29%)
Similarity:379/837 - (45%) Gaps:185/837 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TAENCQFVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLI 72
            ||:....:|.|||.||:|||....|||..|.:.||:||:|||::.:|:.|.|.|:.||:.||||:
Zfish    34 TADEQPHIGCYRLLKTIGKGNFAKVKLAKHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKLL 98

  Fly    73 DHPHVLGLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSIC 137
            :||:::.|.:|.|.:|.|||::|:.||||:|||||..||:..||||..||||:||:.:||...|.
Zfish    99 NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIV 163

  Fly   138 HRDLKPENLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCG 202
            |||||.||||||...||||||||.::....|:.|:|.||||.||.||:.:|:||||.:.||||.|
Zfish   164 HRDLKAENLLLDADMNIKIADFGFSNEFTLGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLG 228

  Fly   203 VILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTL-AEINRH 266
            ||||.|:.|:||||..||::|.|:|.||.:.||.::..||::||:..:.:||.:|.:| .:|.:.
Zfish   229 VILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLVLNPTKRGSLEQQIMKD 293

  Fly   267 PWVTAGGKGELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGCFKEK---------EKLIQEL 322
            .|:..|.:.| ||: |.:|....:..|..|...|.      |.|.:|..         :::...|
Zfish   294 RWMNVGHEDE-ELK-PYIEPQPDYKDPKRTGQHPS------SAGGWKRDIMIRMGYSLDEIQDSL 350

  Fly   323 LSSSHNTEKVIYFLLLERKRRRPALEDDDEIAQKSRSELDAVDPPRKRLDTCRINGTNAPSY-GQ 386
            ::..:|.....|.||..|.      .:.||::.|:|...|..            |...:||: ||
Zfish   351 INQKYNDVMATYLLLDYRN------SELDELSIKARPGTDIT------------NNAQSPSHKGQ 397

  Fly   387 ISEGSPLTPRRQAFNFRSYSSTR------------------------NHQRRSPTTVTSSVRSSS 427
            .|. |.|..||.. :..|.||.|                        ...:::||..|:|:.||.
Zfish   398 RST-SNLKSRRST-DQSSVSSKRPQGDSKHIGSSGSSSKVPPSPLISGDHKKTPTPSTNSILSSG 460

  Fly   428 YHSPTRCNSPMS-----SAQQQANAISRPSSPAA-GTRHSTYGDRDRSGHHSSVSRTPSHSSQKS 486
              :....|||::     ..|...:::..|.|.|: .:..:......|:.||.|:| |.:|.|...
Zfish   461 --TGRSRNSPITERATLGVQNGKDSLHTPGSRASTASAAAVLAASSRTRHHKSLS-TSAHPSPPD 522

  Fly   487 IEGDVVVVREPRIERRDSLRQERGGGSPRDRGDCGIPPGSPGGNSSGSTSASPSVHHRAN-SGPT 550
            :..           .|.|...:|.            |..||...:...:|.:    .|.| |...
Zfish   523 LHA-----------HRPSTANQRA------------PVVSPSAQNINISSMA----DRTNFSRGV 560

  Fly   551 IAISMFH--------DPDSNSVVNPNGSPMMNNSSPGMPGSPCNTPGGQLWKTRLTNIKNSFLGS 607
            .:.|.||        |..:::..:|:.||.:::.:     |....||        |.|.:.|  :
Zfish   561 TSRSTFHAGQQRATRDQQASAYNDPSASPSLSHGN-----SQVRRPG--------TGIFSKF--T 610

  Fly   608 PRFHRRKMQVSADEVHLTPESSP-------ELTKRSWFGNLITTEKDETFTILVKGKPIATVKAH 665
            .:|.||.:...      .|..||       |.::..    |.|.:|.|..|   :|.|....|  
Zfish   611 SKFVRRNLSFR------FPRRSPYEGEGRDEASRPM----LSTADKMEKGT---QGHPSDENK-- 660

  Fly   666 LIHAFLSMAELSHSVVS--------PTSFRVEYKRNGNG---PVMFQRHVKFQVDISA------- 712
              .:|.|.:..|.:..|        |.|.|..:......   |....:.::..:|.::       
Zfish   661 --DSFSSSSPASSTPSSTQASKDTKPRSLRFTWSMKTTSSMEPNEMMKEIRKVLDSNSCEYELRE 723

  Fly   713 ----ICKQGDIAD----------------MLFALTFTLLSGNIRRFRRICEHIQSQV 749
                :|..|:.|.                .|..:.|..:||....|:.|...|.:::
Zfish   724 RFMLLCMSGNPAHDDFVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIANEL 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 132/253 (52%)
UBA_BRSK 298..350 CDD:270525 10/60 (17%)
mark2aXP_009293774.1 STKc_MARK 44..296 CDD:270974 131/251 (52%)
UBA_MARK2 314..367 CDD:270589 11/58 (19%)
MARK2_C 683..781 CDD:213386 15/98 (15%)

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