DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and pimr109

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_001038385.1 Gene:pimr109 / 560132 ZFINID:ZDB-GENE-030131-6182 Length:465 Species:Danio rerio


Alignment Length:289 Identity:79/289 - (27%)
Similarity:129/289 - (44%) Gaps:29/289 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KENNVTAENCQFVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVE---- 63
            ||..:...|.|   .|.:...|.||..|.|..|.....|.:||:|:.:.:|   ..|:.|:    
Zfish   191 KETQIIEINSQ---GYEIGAELDKGGCGTVYEGSRLEDGLQVAVKVSDFKK---KQLISVDGFDE 249

  Fly    64 ---REIAIMKLIDH----PHVLGLSDVYENKKYLYLILEH-VSGGELFDYLVKKGRLTPKE-ARK 119
               .|||:..|.:.    ..::.|.|......:.:::||. :....|||:..:...:.|:: .||
Zfish   250 PLPLEIALHFLANKGPKVKEIIELLDWKVEADHYFMVLERPIPCVSLFDFQNEHRGIIPEDKLRK 314

  Fly   120 FFRQIISALDFCHSHSICHRDLKPENLLLD-EKNNIKIADFGMASLQPAGSMLETSCGSPHYACP 183
            ...|.|.|...|....:.|||:|.||||:: :...:|:.|||...|. ...:.:|..|:..:|.|
Zfish   315 IMLQTIIAAQTCCQRGVFHRDIKLENLLINPDTLEVKLIDFGCGDLL-TEDIYKTFRGTREFAPP 378

  Fly   184 EVIRGEKYDGRKADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIP-HFVPPDCQSLLR 247
            |.....:|.|..|.|||.||:|:.|:....|       :.|:..|....::| :.:..:|.....
Zfish   379 EFWMIGRYRGEPATVWSLGVVLFVLIFKRFP-------EKLDIPKMNNKNMPINGLSKECCDFFH 436

  Fly   248 GMIEVNPDRRLTLAEINRHPWVTAGGKGE 276
            |.:::|...||.|.::|.|.|.....|.|
Zfish   437 GCLQLNQMDRLDLQKLNSHEWFKMEDKEE 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 72/267 (27%)
S_TKc 18..269 CDD:214567 72/265 (27%)
UBA_BRSK 298..350 CDD:270525
pimr109NP_001038385.1 Pkinase 203..458 CDD:278497 72/265 (27%)
PKc_like 203..458 CDD:304357 72/265 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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