DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sff and CG10177

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_651150.1 Gene:CG10177 / 42772 FlyBaseID:FBgn0039083 Length:411 Species:Drosophila melanogaster


Alignment Length:238 Identity:71/238 - (29%)
Similarity:124/238 - (52%) Gaps:21/238 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 KVAIKIINREKLSE---SVLMKVEREIAIMKLIDHPHVLGLSDVYENKKYLYLILEHVSGGELFD 104
            |..:|::|::..|.   ...|:.|   .:.:|..||:::.|....|:::|:|.:|||:. ..:..
  Fly   174 KCTVKMVNKQTQSNDRGDTYMEAE---VLRQLQSHPNIIELMYTVEDERYMYTVLEHLD-CNMQK 234

  Fly   105 YLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNN------IKIADFGMAS 163
            .:.|:|.|:..:||...|..:|||...|...:.|||:||||||:...:.      :|:|:|.:|:
  Fly   235 VIQKRGILSEADARSVMRCTVSALAHMHQLQVIHRDIKPENLLVCSSSGKWNFKMVKVANFDLAT 299

  Fly   164 LQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILYALLVGALPFDD--DNLRQLLEK 226
            .. .||.|...||:|.|..||:|....|| .:.|.||.||.|:.:|.|.:||..  .|.:::...
  Fly   300 YY-RGSKLYVRCGTPCYMAPEMIAMSGYD-YQVDSWSLGVTLFYMLCGKMPFASACKNSKEIYAA 362

  Fly   227 VKRGVFHIP----HFVPPDCQSLLRGMIEVNPDRRLTLAEINR 265
            :..|....|    ..:.|:...|:.|::..:|..|:.:||:::
  Fly   363 IMSGGPTYPKDMESVMSPEATQLIDGLLVSDPSYRVPIAELDK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 71/238 (30%)
UBA_BRSK 298..350 CDD:270525
CG10177NP_651150.1 DCX 18..108 CDD:214711
S_TKc 164..409 CDD:214567 71/238 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.