DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and chek1

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_956487.2 Gene:chek1 / 393162 ZFINID:ZDB-GENE-040426-896 Length:459 Species:Danio rerio


Alignment Length:274 Identity:94/274 - (34%)
Similarity:163/274 - (59%) Gaps:13/274 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLIDHPHVL 78
            ||..:.:.:|||:|..|.|:|.|:....:.||:|:::..| ::..:..|::|:.|.|::.||:::
Zfish     5 FVKDWDVVQTLGEGAYGEVRLLVNKKTEEAVAVKVVDMAK-AKDCIENVKKEVCICKMLSHPNIV 68

  Fly    79 GLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKP 143
            ............|:.||:.|||||||.:.....:..|||.:||:|:|:.:::.||..|.|||:||
Zfish    69 RFFGHRSEGTTQYIFLEYCSGGELFDRIEPDVGMPEKEAHRFFQQLIAGVEYLHSVGITHRDIKP 133

  Fly   144 ENLLLDEKNNIKIADFGMASL---QPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVIL 205
            ||:|||:|:|:||:|||:|::   :.....|...||:..|..||::....::.:.||.|:||::|
Zfish   134 ENILLDDKDNLKISDFGLATMFRHRGRERALNRLCGTLPYVAPELMSRSSFNAQPADTWACGIVL 198

  Fly   206 YALLVGALPFD--DDNLRQLLEKVKRGVFHIP----HFVPPDCQSLLRGMIEVNPDRRLTLAEIN 264
            .|:|.|.||:|  .:|.::.|:.::|..:..|    ..||   .|||..::..||:.|.|:.||.
Zfish   199 TAMLAGELPWDQPSENCQEYLDWLERKTYLTPWKKIDAVP---LSLLSKILLHNPEDRFTIPEIK 260

  Fly   265 RHPWVTAGGKGELE 278
            :|.|.:...|..::
Zfish   261 KHRWFSRSFKSAVQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 90/261 (34%)
UBA_BRSK 298..350 CDD:270525
chek1NP_956487.2 None
Blue background indicates that the domain is not in the aligned region.

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