DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and mark3a

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_021336197.1 Gene:mark3a / 334300 ZFINID:ZDB-GENE-030131-6232 Length:746 Species:Danio rerio


Alignment Length:794 Identity:239/794 - (30%)
Similarity:353/794 - (44%) Gaps:162/794 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLIDHPHVLG 79
            :|.|||.||:|||....|||..|.:.|.:||||:|::.:|:.:.|.|:.||:.|||.::||:::.
Zfish    54 IGNYRLLKTIGKGNFAKVKLARHILTGSEVAIKMIDKTQLNPTSLQKLSREVTIMKNLNHPNIVK 118

  Fly    80 LSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPE 144
            |.:|.|.:|.|:|::|:.||||:|||||..||:..||||..||||:||:.:||...|.|||||.|
Zfish   119 LFEVIETEKTLFLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAE 183

  Fly   145 NLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILYALL 209
            |||||...||||||||.::....||.|:|.||||.||.||:.:|:||||.:.||||.|||||.|:
Zfish   184 NLLLDGDMNIKIADFGFSNEFMVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 248

  Fly   210 VGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPWVTAGGK 274
            .|:||||..||::|.|:|.||.:.||.::..||::||:..:.:||.:|.||.:|.:..|:.:|.:
Zfish   249 SGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPAKRGTLEQIMKERWINSGFE 313

  Fly   275 GELELELPMMEVVQTHVIPTATAVDPDVLNAICSLGCFKEKEKLIQELLSSSHNTEKVIYFLLLE 339
            .: ||: |..|       |.|...|...::.|..:|..|||   |.|.|...:..|....:|||.
Zfish   314 DD-ELK-PFTE-------PDADISDQKRIDVIVGMGFSKEK---IHESLFKMNYDEVTAIYLLLG 366

  Fly   340 RKRRRPALEDDDEIAQKSRSELDAVDPPRKRLDTCRINGTNAPSYGQISEGSPLTPRRQAFNFRS 404
            ||..       :|::..|.:...:|...|...:.    .:.:||:.::.              ||
Zfish   367 RKTH-------EEVSDSSSNSNLSVAKTRPSSEM----NSQSPSHLKVQ--------------RS 406

  Fly   405 YSS-----TRNHQRRSPTTVTSSVRSSSYHSPTRCNSPMSSAQQQANAISR------PSSPAAGT 458
            .||     :|.|..:......:::.:|....|...:   |..:|:...|:|      |.||..|.
Zfish   407 ISSSESRKSRRHSEQVGVVANNALSNSKRVVPVTAD---SEVKQEGGVIARKLPNHSPPSPLLGN 468

  Fly   459 RHSTYGDR--DRSGHHSSVSRTPSHSSQKSIEGDVVVVREPRIERRDSLRQERGGGSPRDRGDCG 521
            .::.....  ||...:|..|...|.|...|.....|.......:|...:                
Zfish   469 ANNPNKTEIPDRKKGNSITSNNISGSGSMSRRNTYVCTERNNTDRLSVI---------------- 517

  Fly   522 IPPGSPGGNSSGSTSASPSVHHRANSGPTIAISMFHDPDSNSVVNPNGSPMMN------------ 574
                 |.|..: |.|.|||  .|.....|.:||....||....  |.||...:            
Zfish   518 -----PNGKEN-SVSLSPS--SRDPGASTHSISTSVTPDKTRF--PRGSASRSTFHGQVRDRRTA 572

  Fly   575 --NSSPGMPGSPCNTPGGQLWKTRLTN--------------IKNSFLGSPRFHRRKMQVSADEVH 623
              |..|..|..|.:........|:||:              :...|..|.||......||.|:  
Zfish   573 TYNGPPASPAQPRSRANANNLLTKLTSKLTRRNMSFRFSKRVSTEFERSGRFEGSSRHVSGDQ-- 635

  Fly   624 LTPESSPELTKRSWFGNLITTEKDETFTILVKGKPIATVKAHLIHAFLSMAELSHSVVSPTSFRV 688
                                 :|||       ||.....|...:....||.  :.|.:.|.....
Zfish   636 ---------------------QKDE-------GKDGKDGKPRSLRFTWSMN--TTSTMEPADIIN 670

  Fly   689 EYKR--NGNGPVMFQRH----------------VKFQVDISAICKQGDIADMLFALTFTLLSGNI 735
            |.:.  :.|.....||.                |:::::   :||...::  |..:.|..:|||.
Zfish   671 EIRTVLDANSCSYQQRECFLLLCAHGDSHTDSLVQWEME---VCKLPRLS--LNGVRFKRISGNS 730

  Fly   736 RRFRRICEHIQSQV 749
            ..|:.|...|..::
Zfish   731 IAFKNIASKIAGEL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 130/252 (52%)
UBA_BRSK 298..350 CDD:270525 15/51 (29%)
mark3aXP_021336197.1 STKc_MARK 56..308 CDD:270974 129/251 (51%)
UBA_like_SF 326..368 CDD:473871 13/44 (30%)
MARK1-3_C 647..744 CDD:213381 20/103 (19%)

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