DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and Nim1k

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_006232044.1 Gene:Nim1k / 310376 RGDID:1308116 Length:436 Species:Rattus norvegicus


Alignment Length:391 Identity:117/391 - (29%)
Similarity:193/391 - (49%) Gaps:59/391 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VTAENCQ------------FVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVL 59
            :|.:.||            .:|.||:...:|.|....||||:|.:..:||||||:::.||.:...
  Rat    51 LTQDMCQDEKVVREITLGKRIGFYRIRGEIGSGNFSQVKLGIHSLTKEKVAIKILDKTKLDQKTQ 115

  Fly    60 MKVEREIAIMKLIDHPHVLGLSDVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQI 124
            ..:.|||:.|:.:.||:::.|.:|.|....|:|::|:..|||||..:..:|:|:..|::..|.||
  Rat   116 RLLSREISSMEKLHHPNIVRLYEVVETLSKLHLVMEYAGGGELFGKISTEGKLSEPESKLIFSQI 180

  Fly   125 ISALDFCHSHSICHRDLKPENLLLDEKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGE 189
            :||:...|.:.|.|||||.||:.......:|:.|||.:::...|.||.|.||||.||.||:.|.|
  Rat   181 VSAVKHMHENQIIHRDLKAENVFYTSSTCVKVGDFGFSTVSKKGEMLNTFCGSPPYAAPELFRDE 245

  Fly   190 KYDGRKADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNP 254
            .|.|...|:|:.||:||.::.|.:||..:.:.:|.:.:..|.:.||..|...|..|:||:::..|
  Rat   246 HYVGVYVDIWALGVLLYFMVTGTMPFRAETVAKLKKSILEGAYSIPQHVSEPCHRLIRGVLQPTP 310

  Fly   255 DRRLTLAEINRHPWVTAGGKGELELELPMMEVVQTHVIPTATAVDPDVLNA--ICSLGCFKEKEK 317
            ..|..:..|..:.|:..                    :|..:.::|..|:.  :......||:|.
  Rat   311 AERYGINYIMSNEWMRG--------------------VPYPSPLEPFQLDPKHLSETSTLKEEEN 355

  Fly   318 LIQELLSSSHNTEKVI---------------YFLLLERKRRRPALED----------DDEIAQKS 357
            .::..|.....|::.|               |.::|.|.:||.|||.          |.::.:.|
  Rat   356 EVKSTLEHLGITDEHIRNNQGRDARSSITGVYRIILHRVQRRKALESVPMATLPEPKDKDLKKGS 420

  Fly   358 R 358
            |
  Rat   421 R 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 93/252 (37%)
UBA_BRSK 298..350 CDD:270525 16/78 (21%)
Nim1kXP_006232044.1 STKc_NIM1 71..325 CDD:270977 93/253 (37%)

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