DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and Tssk4

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_001400875.1 Gene:Tssk4 / 290229 RGDID:1560814 Length:339 Species:Rattus norvegicus


Alignment Length:306 Identity:99/306 - (32%)
Similarity:161/306 - (52%) Gaps:29/306 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMK-VEREIAIMKLIDHPHVLGLS 81
            |.:.|.:|.|..|.|....:......||:|||:::|.||..|.| :.|||.:||::.|.:::...
  Rat    25 YEVGKVIGHGSYGTVYEAYYTKQKVMVAVKIISKKKASEDYLNKFLPREIQVMKVLRHKYLINFY 89

  Fly    82 DVYENKKYLYLILEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICH-------- 138
            ...|....:|:|||...||::.:::.:.|..:...|.|:|.|:...:.:.||..|.|        
  Rat    90 QAIETTSRVYIILELAQGGDVLEWIQRYGACSETLAGKWFSQMALGIAYLHSKGIVHRLTPSLSA 154

  Fly   139 --RDLKPENLLLDEKNNIKIADFGMASLQPAGS----------------MLETSCGSPHYACPEV 185
              ||||.||||||::.|:||:|||.|.:.|:..                :.:|.|||..|||||:
  Rat   155 AGRDLKLENLLLDKRENVKISDFGFAKMVPSSQPVRSSPSYRQMNCLSHLSQTYCGSFAYACPEI 219

  Fly   186 IRGEKYDGRKADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGV-FHIPHFVPPDCQSLLRGM 249
            :.|..|:...:|.||.|||||.|:|..|||||.||::||.:.::.| |.....:..:|::|:..:
  Rat   220 LLGLPYNPFLSDTWSMGVILYTLVVARLPFDDTNLKKLLRETQKEVTFPANLTISQECKNLILQL 284

  Fly   250 IEVNPDRRLTLAEINRHPWVTAGGKGELELELPMMEVVQTHVIPTA 295
            :. ...:|.|:.::.|.||:......:...|:.::|.:......||
  Rat   285 LR-PATKRATILDVLRDPWMLKFQSEQPSNEIRLLEAMYQPASTTA 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 94/278 (34%)
UBA_BRSK 298..350 CDD:270525
Tssk4NP_001400875.1 STKc_TSSK4-like 24..302 CDD:271064 93/277 (34%)
Blue background indicates that the domain is not in the aligned region.

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