DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and unc-22

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_502274.2 Gene:unc-22 / 178135 WormBaseID:WBGene00006759 Length:7158 Species:Caenorhabditis elegans


Alignment Length:957 Identity:202/957 - (21%)
Similarity:339/957 - (35%) Gaps:264/957 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLIDHPHVLGLSD 82
            |.:.:.||.|..|:|........|...|.|.:...  .||....|.:||..|.::.||.::.|.|
 Worm  6261 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP--HESDKETVRKEIQTMSVLRHPTLVNLHD 6323

  Fly    83 VYENKKYLYLILEHVSGGELFDYLV-KKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENL 146
            .:|:...:.:|.|.:||||||:.:. :..:::..||.::.||:...|...|.::..|.||||||:
 Worm  6324 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 6388

  Fly   147 LLDEK--NNIKIADFGM-ASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILYAL 208
            :...|  |.:|:.|||: |.|.|..|:..|: |:..:|.|||..| |..|...|:||.||:.|.|
 Worm  6389 MFTTKRSNELKLIDFGLTAHLDPKQSVKVTT-GTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYIL 6451

  Fly   209 LVGALPFDDDNLRQLLEKVKRGVFHIPHF----VPPDCQSLLRGMIEVNPDRRLTLAEINRHPWV 269
            |.|..||..:|..:.|..||...:::...    :..|.:..:|.::..:|:.|:|:.:...|||:
 Worm  6452 LSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 6516

  Fly   270 TAGGKGELELELP------MMEVVQTH-------------------------------------- 290
            |.|.....:.::|      :.:.::|.                                      
 Worm  6517 TPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRS 6581

  Fly   291 -------VIPTATAV-DPDVLNAICS--------LGCFKEKEKLIQEL----------------- 322
                   |.|..|.| :....|..|.        :...|:..:|.|.:                 
 Worm  6582 EAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINR 6646

  Fly   323 ------------LSSSHNTEKVIYFLLLERKRRRPALEDDDEIAQKSRSELDAVDPP-------- 367
                        ..:|:.|::.|.||.:.| ...|...:..|..:|:.|      ||        
 Worm  6647 VKGDDKGEYTVRAKNSYGTKEEIVFLNVTR-HSEPLKFEPLEPMKKAPS------PPRVEEFKER 6704

  Fly   368 ----------RKRLD--------TCRINGTNAPSYGQISEGSPLTPRRQAFNFRS-YSSTRNHQR 413
                      |.||.        ||.:.|...|:...:.:|.|:...|...:||| ..|......
 Worm  6705 RSAPFFTFHLRNRLIQKNHQCKLTCSLQGNPNPTIEWMKDGHPVDEDRVQVSFRSGVCSLEIFNA 6769

  Fly   414 RSPTTVTSSVRSSSYHSPTRCNSPMSSAQQQANAISRPSS---PAAGTRHSTYGDRDRSGHHSSV 475
            |.....|.:|.:::..........::...:....|.|.||   ..|....||..|.:||..::.:
 Worm  6770 RVDDAGTYTVTATNDLGVDVSECVLTVQTKGGEPIPRVSSFRPRRAYDTLSTGTDVERSHSYADM 6834

  Fly   476 SRTPSHSSQKSIEGDVVVVREPRI-ERRDSLRQERGGGSPRDRGDCGIPPGSPGGNSSGSTSASP 539
            .|       :|:..||    .|.: ...|.|:.:.....|.............||::..|.:.| 
 Worm  6835 RR-------RSLIRDV----SPDVRSAADDLKTKITNELPSFTAQLSDSETEVGGSAEFSAAVS- 6887

  Fly   540 SVHHRANSGPTIAISMFH------DPDSN---SVVNPNGSPMMNNSSPGMPGS----PCNTPGGQ 591
                   ..|...|...|      :.||.   |.|....:..::::.....|.    ..|:.|.:
 Worm  6888 -------GQPEPLIEWLHNGERISESDSRFRASYVAGKATLRISDAKKSDEGQYLCRASNSAGQE 6945

  Fly   592 LWKTRLTNIKNSFLGSPRFHRRKMQVSADEVHLTPESSPELTKRSWFGNLITTEKDETFTILVKG 656
            ..:..|| :|..   .|..:....|....|:.:|....         |.::...:..||...|:|
 Worm  6946 QTRATLT-VKGD---QPLLNGHAGQAVESELRVTKHLG---------GEIVNNGESVTFEARVQG 6997

  Fly   657 KPIATVKAHLIHAFLSMAELSHSVVSPTSFRVEYKRNG----NGPVMFQRHVKFQVDISAICKQG 717
            .|                           ..|.:.|||    ||            |.::|.:.|
 Worm  6998 TP---------------------------EEVLWMRNGQELTNG------------DKTSISQDG 7023

  Fly   718 DIADMLFALTFTLLSGNIRRFRRICEHIQSQVCSKR----------FPGPSSPPTVTSVTQAVSE 772
            :      .|:||:.|.:...    ..|.|.:|.||.          ..|..:.|.||.:..:|  
 Worm  7024 E------TLSFTINSADASD----AGHYQLEVRSKGTNLVSVASLVVVGEKADPPVTRLPSSV-- 7076

  Fly   773 SSSCGSVSSERLSYKR------------QVIENDMENDSIFSYKSGN 807
            |:..|..::..:.::.            :.||   :|:.:.|.|:||
 Worm  7077 SAPLGGSTAFTIEFENVEGLTVQWFRGSEKIE---KNERVKSVKTGN 7120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 82/258 (32%)
UBA_BRSK 298..350 CDD:270525 13/89 (15%)
unc-22NP_502274.2 Ig 5..96 CDD:472250
Ig strand B 22..25 CDD:409353
Ig strand C 34..38 CDD:409353
Ig strand E 64..68 CDD:409353
Ig strand F 78..83 CDD:409353
Ig strand G 91..94 CDD:409353
Ig 111..196 CDD:472250
Ig strand B 128..132 CDD:409353
Ig strand C 141..145 CDD:409353
Ig strand E 171..175 CDD:409353
Ig strand F 185..190 CDD:409353
IG_like 384..467 CDD:214653
Ig strand B 395..399 CDD:409353
Ig strand C 408..412 CDD:409353
Ig strand E 433..437 CDD:409353
Ig strand F 447..452 CDD:409353
I-set 980..1071 CDD:400151
Ig strand B 997..1001 CDD:409353
Ig strand C 1010..1014 CDD:409353
Ig strand E 1035..1039 CDD:409353
Ig strand F 1051..1056 CDD:409353
Ig strand G 1064..1067 CDD:409353
Ig 1150..1214 CDD:409353
Ig strand C 1158..1162 CDD:409353
Ig strand E 1184..1188 CDD:409353
Ig strand F 1198..1203 CDD:409353
Ig strand G 1211..1214 CDD:409353
Ig 1239..1309 CDD:409353
Ig strand B 1239..1243 CDD:409353
Ig strand C 1252..1255 CDD:409353
Ig strand E 1278..1282 CDD:409353
Ig strand F 1292..1297 CDD:409353
Ig strand G 1306..1309 CDD:409353
Ig 1331..1399 CDD:472250
Ig strand B 1331..1335 CDD:409353
Ig strand C 1343..1347 CDD:409353
Ig strand E 1369..1373 CDD:409353
Ig strand F 1383..1388 CDD:409353
Ig strand G 1392..1395 CDD:409353
Ig 1404..>1474 CDD:472250
Ig 1505..1591 CDD:472250
Ig strand B 1513..1517 CDD:409353
Ig strand C 1530..1534 CDD:409353
Ig strand E 1557..1561 CDD:409353
Ig strand F 1571..1576 CDD:409353
Ig strand G 1584..1587 CDD:409353
FN3 <1602..>1775 CDD:442628
Ig 1808..1885 CDD:472250
Ig strand B 1813..1817 CDD:409353
Ig strand C 1826..1830 CDD:409353
Ig strand E 1851..1855 CDD:409353
Ig strand F 1865..1870 CDD:409353
FN3 <1866..>2080 CDD:442628
Ig strand G 1880..1883 CDD:409353
FN3 1992..2080 CDD:238020
Ig 2101..2182 CDD:472250
Ig strand B 2109..2113 CDD:409353
Ig strand C 2122..2126 CDD:409353
Ig strand E 2148..2152 CDD:409353
Ig strand F 2162..2167 CDD:409353
FN3 <2163..>2382 CDD:442628
Ig strand G 2177..2180 CDD:409353
FN3 2286..2376 CDD:238020
Ig 2396..2476 CDD:472250
Ig strand B 2405..2409 CDD:409353
Ig strand C 2418..2422 CDD:409353
Ig strand E 2442..2446 CDD:409353
Ig strand F 2456..2461 CDD:409353
Ig strand G 2469..2472 CDD:409353
FN3 2480..2571 CDD:238020
FN3 2580..2667 CDD:238020
Ig 2690..2768 CDD:472250
Ig strand B 2697..2701 CDD:409353
Ig strand C 2710..2714 CDD:409353
Ig strand E 2734..2738 CDD:409353
Ig strand F 2748..2753 CDD:409353
Ig strand G 2761..2764 CDD:409353
FN3 2772..2861 CDD:238020
FN3 2884..>3273 CDD:442628
Ig 3279..3359 CDD:472250
Ig strand B 3287..3291 CDD:409353
Ig strand C 3300..3304 CDD:409353
Ig strand E 3325..3329 CDD:409353
Ig strand F 3339..3344 CDD:409353
Ig strand G 3352..3355 CDD:409353
FN3 3363..3454 CDD:238020
FN3 3464..3552 CDD:238020
FN3 <3600..3952 CDD:442628
FN3 3951..4042 CDD:238020
FN3 4051..4138 CDD:238020
FN3 4136..>4682 CDD:442628
FN3 4431..4916 CDD:442628
FN3 <4862..>5133 CDD:442628
Ig 5144..5225 CDD:472250
Ig strand B 5152..5156 CDD:409353
Ig strand C 5165..5169 CDD:409353
Ig strand E 5191..5195 CDD:409353
Ig strand F 5205..5210 CDD:409353
Ig strand G 5218..5221 CDD:409353
FN3 5229..5323 CDD:238020
FN3 5331..5420 CDD:238020
FN3 5431..5520 CDD:238020
I-set 5533..5622 CDD:400151
Ig strand B 5550..5554 CDD:409353
Ig strand C 5563..5567 CDD:409353
Ig strand E 5588..5592 CDD:409353
Ig strand F 5602..5607 CDD:409353
Ig strand G 5615..5618 CDD:409353
FN3 <5696..>5904 CDD:442628
I-set 5923..6010 CDD:400151
Ig strand B 5940..5944 CDD:409353
Ig strand C 5953..5957 CDD:409353
Ig strand E 5978..5982 CDD:409353
Ig strand F 5992..5997 CDD:409353
Ig 6033..6108 CDD:472250
Ig strand B 6036..6040 CDD:409353
Ig strand C 6049..6053 CDD:409353
Ig strand E 6074..6078 CDD:409353
Ig strand F 6088..6093 CDD:409353
Ig strand G 6101..6104 CDD:409353
FN3 6112..6199 CDD:238020
STKc_Twitchin_like 6258..6516 CDD:271016 82/258 (32%)
IgI_Twitchin_like 6586..6674 CDD:409541 14/87 (16%)
Ig strand A 6586..6589 CDD:409541 0/2 (0%)
Ig strand A' 6593..6597 CDD:409541 1/3 (33%)
Ig strand B 6600..6607 CDD:409541 1/6 (17%)
Ig strand C 6615..6620 CDD:409541 0/4 (0%)
Ig strand C' 6622..6625 CDD:409541 0/2 (0%)
Ig strand D 6631..6636 CDD:409541 0/4 (0%)
Ig strand E 6639..6644 CDD:409541 0/4 (0%)
Ig strand F 6653..6661 CDD:409541 0/7 (0%)
Ig strand G 6664..6674 CDD:409541 4/9 (44%)
I-set 6708..6796 CDD:400151 17/87 (20%)
Ig strand C 6738..6742 CDD:409353 0/3 (0%)
Ig strand E 6762..6766 CDD:409353 1/3 (33%)
Ig strand F 6776..6781 CDD:409353 2/4 (50%)
Ig strand G 6790..6793 CDD:409353 0/2 (0%)
I-set 6863..6953 CDD:400151 17/98 (17%)
Ig strand B 6880..6884 CDD:409570 0/3 (0%)
Ig strand C 6893..6897 CDD:409570 1/3 (33%)
Ig strand E 6919..6923 CDD:409570 0/3 (0%)
Ig strand F 6933..6938 CDD:409570 0/4 (0%)
Ig strand G 6946..6949 CDD:409570 0/2 (0%)
Ig 6983..>7041 CDD:472250 18/106 (17%)
Ig strand B 6989..6993 CDD:409353 2/3 (67%)
Ig strand C 7002..7006 CDD:409353 1/3 (33%)
Ig strand E 7024..7030 CDD:409353 2/11 (18%)
Ig strand F 7040..7045 CDD:409353 2/4 (50%)
Ig 7067..7142 CDD:472250 13/59 (22%)
Ig strand C 7097..7101 CDD:409353 0/3 (0%)
Ig strand E 7120..7126 CDD:409353 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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