DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and Snrk

DIOPT Version :10

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_620188.1 Gene:Snrk / 170837 RGDID:69653 Length:746 Species:Rattus norvegicus


Alignment Length:737 Identity:191/737 - (25%)
Similarity:303/737 - (41%) Gaps:173/737 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 QFVGPYRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLIDHPHV 77
            :..|.|.|:||||:|...:|||..|...|:|||:|:|::.||.......:.:|:..|||:.||::
  Rat    11 KIAGLYDLDKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLATGHLFQEVRCMKLVQHPNI 75

  Fly    78 LGLSDVYENKKYLYLILEHVSGGELFDYLVK-KGRLTPKEARKFFRQIISALDFCHSHSICHRDL 141
            :.|.:|.:.:..||||||...||::|||::| :..|....|:|:|.||:.|:.:||...:.||||
  Rat    76 VRLYEVIDTQTKLYLILELGDGGDMFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHKLHVVHRDL 140

  Fly   142 KPENLLLDEKNN-IKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVIL 205
            ||||::..||.. :|:.|||.::....|..|.|||||..|:.||::.|::||....|:||.||||
  Rat   141 KPENVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDEYDAPAVDIWSLGVIL 205

  Fly   206 YALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIEVNPDRRLTLAEINRHPWVT 270
            :.|:.|..||.:.|..:.|..:....:.:|..|...|:.|:..|::.:|.||.:|.||..|||:.
  Rat   206 FMLVCGQPPFQEANDSETLTMIMDCKYTVPPRVSAGCRDLITRMLQRDPKRRASLEEIESHPWLQ 270

  Fly   271 -AGGKGELELELPMM-----------EVVQTHVIPTATAVDPDVLNAICSLGCFKEKEKLIQELL 323
             .......:..:|::           .::|..|                 ||...:::.:::.|.
  Rat   271 GVDPSPATKYNIPLVSYKNLSEEEHNSIIQRMV-----------------LGDIADRDAIVEALE 318

  Fly   324 SSSHNTEKVIYFLLLERKRRR------------PA-------------------LEDD------- 350
            ::.:|.....||||.||..|.            |:                   ||||       
  Rat   319 TNRYNHITATYFLLAERILREKQEKEIQTRSASPSNIKAQFRQSWPTKIDVPQDLEDDLTATPLS 383

  Fly   351 ------------DEIAQKSRSELDAVDPPRKRLDTCRINGTNAPSYGQISEGS--PLTPRRQAFN 401
                        |.:....||:  .:..|.|:.:...:.|   |:...:...|  |....|:...
  Rat   384 HATVPQSPARAGDSVLNGHRSK--GLCDPAKKDELPELAG---PALSTVPPASLKPAASGRKCLF 443

  Fly   402 FRSYSSTRNHQRRSPTTVTSSV----------RSSSYHSPTRCNSPMSSAQQQAN---------A 447
            ........:.:.:.|.::::.|          |.:|..|....|......:....         .
  Rat   444 RVEEDEEEDEEDKKPVSLSTQVVLRRKPSVTNRLTSRKSAPVLNQIFEEGESDDEFDMDENLPPK 508

  Fly   448 ISR----PSSPAAGTRHSTYGDRDRSGHHSSVSRTPS----HSSQKSIEGDVVVVREPRIERRDS 504
            :||    .:||  ||.|..|..|...|..||.|.:.:    ..|::.::.|..:...  ..||||
  Rat   509 LSRLKMNIASP--GTVHKRYHRRKSQGRGSSCSSSETSDDDSESRRRLDKDSGLAYS--WHRRDS 569

  Fly   505 LR-----QERGGGSPRDRGDCGIPPGSPG---------GNSSGSTSASPSVHHR------ANSGP 549
            ..     :..|||..:..|..|:...|||         |.|.|:.|.:.....|      ::|.|
  Rat   570 SEGPPGSEGDGGGQSKPSGGGGVDKASPGEQGTGGSGQGGSGGTPSGTAGSSRRCAGPDSSSSSP 634

  Fly   550 TIAI------------------SMFH------DPD----SNSVVNPNGSPMMNNSSPGMPGSPCN 586
            ..|.                  |..|      ||.    |:..|....:..|..|:|| ||    
  Rat   635 ASAAPRGAELVQSLKLVSLCLGSQLHGAKYILDPQKALLSSVKVQERSTWKMCISAPG-PG---- 694

  Fly   587 TPGGQLWKTRLTNIKNSFLGSP 608
             |...|...|...::|:.|..|
  Rat   695 -PSADLDPVRTKKLRNNVLQLP 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 102/254 (40%)
UBA_BRSK 298..350 CDD:270525 14/82 (17%)
SnrkNP_620188.1 STKc_SNRK 12..269 CDD:270976 102/256 (40%)
UBA_SNRK 288..335 CDD:270524 10/63 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..414 5/32 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 494..638 34/147 (23%)

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