DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and pimr70

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_021329730.1 Gene:pimr70 / 100330734 ZFINID:ZDB-GENE-120215-28 Length:258 Species:Danio rerio


Alignment Length:290 Identity:69/290 - (23%)
Similarity:104/290 - (35%) Gaps:97/290 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IGKKVAIKIINREKLS-ESVLMKVEREIAIMKLIDH----PHVLGLSDVYENKKYLYLILEHVSG 99
            :..||.:|..:.:.|| ......:..|:|:..|.::    |.::.:.:..|......:|||..|.
Zfish     8 VAMKVVLKSSDMDYLSIPGHPTPLPLEVALTILANNGPTVPQIIQMLEWQECPDSYIMILERPSP 72

  Fly   100 GE-LFDYLVKK-GRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLD-EKNNIKIADFGM 161
            .| |||:|.:. |.|:....|....|::.|...|....:.|||:|.|.||:: |.:.:|:.||| 
Zfish    73 CEDLFDFLERHGGTLSENMTRHIMWQVVQAAHMCCQRGVLHRDIKLEKLLINKETHEVKLIDFG- 136

  Fly   162 ASLQPAGSMLETSC-----------------------------------------GSPHYACPEV 185
                 .|.:|:||.                                         ||..|..||.
Zfish   137 -----CGDLLKTSAYATFCGMYCPSLQFEILLLQHHILNSISFLTVTNEENLLFSGSEDYCPPEY 196

  Fly   186 IRGEKYDGRKADVWSCGVILYALLVGALPFDDDNLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMI 250
            ....::.|:.|.|||.||:||.||.|..|...|                                
Zfish   197 RSSGRHFGKAATVWSLGVLLYELLCGEPPKHSD-------------------------------- 229

  Fly   251 EVNPDRRLTLAEINRHPWVTAG-GKGELEL 279
                   |.|.|  ...|:.:| .||||.:
Zfish   230 -------LDLTE--ERTWIKSGLSKGELAI 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 63/277 (23%)
S_TKc 18..269 CDD:214567 63/277 (23%)
UBA_BRSK 298..350 CDD:270525
pimr70XP_021329730.1 PKc_like 7..245 CDD:328722 65/283 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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