DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and pimr212

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:NP_001120941.1 Gene:pimr212 / 100151754 ZFINID:ZDB-GENE-070424-268 Length:615 Species:Danio rerio


Alignment Length:277 Identity:72/277 - (25%)
Similarity:114/277 - (41%) Gaps:47/277 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YRLEKTLGKGQTGLVKLGVHCVIGKKVAIKIINREKLSESVLMKVEREIAIMKLIDHP------- 75
            |.:|..||:|..|.|..|.....|.:||:|:.:         .|.|:....:..|::|       
Zfish   335 YEIESQLGEGGCGAVFAGTRLEDGLQVAVKVCD---------FKEEKRFISVDGIENPLPLEIAL 390

  Fly    76 HVLG------------LSDVYENKKYLYLILEHVSGGELFDYLVK-KGRLTPKEARKFFRQIISA 127
            |.|.            |....|:..|..::.:.:....|.::|:. ||.:...:.||...|...|
Zfish   391 HFLANKSPKVKEIVELLDWKVEDDNYFMVLEQPIPCMSLHEFLLDCKGIVPEDKLRKIMYQTTIA 455

  Fly   128 LDFCHSHSICHRDLKPENLLLD-EKNNIKIADFGMASLQPAGSMLETSCGSPHYACPEVIRGEKY 191
            ...|....:.|||:|.||||:: :...:|:.|||...|....| .::..|:..|..||.:...:|
Zfish   456 AQTCCQRGVLHRDIKLENLLINPDTLEVKLIDFGCGELLTEDS-YQSFRGTREYFPPEFLTTGRY 519

  Fly   192 DGRKADVWSCGVILYALLVGALPFDDD-----NLRQLLEKVKRGVFHIPHFVPPDCQSLLRGMIE 251
            .|..|.|||.||:|:.|:....|...|     |.|..::.:.|           ||.....|.::
Zfish   520 HGEPATVWSLGVVLFLLVFYRFPEQSDMPRMNNRRLRIKGLSR-----------DCCDFFHGCLQ 573

  Fly   252 VNPDRRLTLAEINRHPW 268
            .|...||.|..::.|.|
Zfish   574 FNYKDRLELQNLSSHKW 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 72/277 (26%)
S_TKc 18..269 CDD:214567 72/277 (26%)
UBA_BRSK 298..350 CDD:270525
pimr212NP_001120941.1 PKc_like 335..591 CDD:304357 72/277 (26%)
S_TKc 335..591 CDD:214567 72/277 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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