DRSC/TRiP Functional Genomics Resources

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Protein Alignment sff and pimr50

DIOPT Version :9

Sequence 1:NP_648814.3 Gene:sff / 39732 FlyBaseID:FBgn0036544 Length:861 Species:Drosophila melanogaster
Sequence 2:XP_017212812.1 Gene:pimr50 / 100006144 ZFINID:ZDB-GENE-070912-463 Length:321 Species:Danio rerio


Alignment Length:207 Identity:69/207 - (33%)
Similarity:107/207 - (51%) Gaps:21/207 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LGKGQTGLVKLGVHCVIGKKVAIKIINRE----KLSESVLMKVEREIAIMKLIDH----PHVLGL 80
            ||:|:.|.|..|:....|..||||.:::|    :|......::..|:|:|..:..    |.||.|
Zfish    84 LGRGRFGSVFAGIRRSDGLPVAIKYVSKEPTDTRLKVDGQGRLPLEVALMTRVSSAPVCPSVLQL 148

  Fly    81 SDVYENKKYLYLILEHVSG-GELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPE 144
            .|.:::::...||||..:. .:|..:..:.|.|....|:|...|:|:||..|.|..:.|||:|||
Zfish   149 LDWFDHRRRYVLILERPAPCQDLQSFCEENGCLDEPLAKKVLVQLIAALKHCESRRVLHRDVKPE 213

  Fly   145 NLLLD-EKNNIKIADFGMASLQPAGSMLETS-----CGSPHYACPEVIRGEKYDGRKADVWSCGV 203
            |||:. :.::||:.|||      .|.:::.|     .|:|.:|.||..|..:|......|||.||
Zfish   214 NLLISTDSHDIKLLDFG------CGDLMKDSAYRYFAGTPAFAPPEWFRHHRYHASPLTVWSIGV 272

  Fly   204 ILYALLVGALPF 215
            .||.:|....||
Zfish   273 TLYNILCDCFPF 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sffNP_648814.3 STKc_BRSK1_2 16..269 CDD:270983 69/207 (33%)
S_TKc 18..269 CDD:214567 69/207 (33%)
UBA_BRSK 298..350 CDD:270525
pimr50XP_017212812.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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