Sequence 1: | NP_001261898.1 | Gene: | pHCl-1 / 39730 | FlyBaseID: | FBgn0264908 | Length: | 978 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097669.2 | Gene: | nAChRalpha4 / 40521 | FlyBaseID: | FBgn0266347 | Length: | 539 | Species: | Drosophila melanogaster |
Alignment Length: | 370 | Identity: | 75/370 - (20%) |
---|---|---|---|
Similarity: | 143/370 - (38%) | Gaps: | 73/370 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 338 KEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRGTLTVNVNVLLLSLASPD 402
Fly 403 ESSLKYEV---EFLLNQQWNDPRLQYGNKSHYDFLNALH-HHDSIWTPD--TYFIMHGDFKDPII 461
Fly 462 PMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSMESISYE--EAQIKYVWKN--- 521
Fly 522 -------DEDTLRKSPSLTTLNAYLIKNQT--TACDQNSWRGNYSCLQVELTFTRDRAYYFTTVF 577
Fly 578 IP--GIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCM 640
Fly 641 CFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQRLPAVLSRI 685 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pHCl-1 | NP_001261898.1 | Neur_chan_LBD | 338..566 | CDD:280998 | 52/247 (21%) |
Neur_chan_memb | 578..>682 | CDD:280999 | 20/105 (19%) | ||
nAChRalpha4 | NP_001097669.2 | LIC | 1..505 | CDD:273305 | 75/370 (20%) |
Neur_chan_LBD | 12..227 | CDD:280998 | 53/250 (21%) | ||
Neur_chan_memb | 234..505 | CDD:280999 | 21/112 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |