Sequence 1: | NP_001261898.1 | Gene: | pHCl-1 / 39730 | FlyBaseID: | FBgn0264908 | Length: | 978 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_525098.1 | Gene: | nAChRbeta3 / 33228 | FlyBaseID: | FBgn0031261 | Length: | 441 | Species: | Drosophila melanogaster |
Alignment Length: | 321 | Identity: | 67/321 - (20%) |
---|---|---|---|
Similarity: | 123/321 - (38%) | Gaps: | 50/321 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 380 RPHNRGTLTVNVNV-LLLSLASPDESSLKYEVEFLLNQQWNDPRLQYGNKSHYDFLNALHHHDS- 442
Fly 443 IWTPD-TYFIMHGDFKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHIFPFDDPKCSFSME 506
Fly 507 SISYEEAQIKYVWKN---------DEDTLRKSP--SLTTLNAYLIKNQTTACDQNSWRGNYSCLQ 560
Fly 561 VELTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPV 625
Fly 626 VSNLTAMNV-WDGVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQRLPAVLSRI 685 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pHCl-1 | NP_001261898.1 | Neur_chan_LBD | 338..566 | CDD:280998 | 41/199 (21%) |
Neur_chan_memb | 578..>682 | CDD:280999 | 23/104 (22%) | ||
nAChRbeta3 | NP_525098.1 | LIC | 39..437 | CDD:273305 | 67/321 (21%) |
Neur_chan_LBD | 52..247 | CDD:280998 | 41/201 (20%) | ||
Neur_chan_memb | 255..434 | CDD:280999 | 24/111 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |