Sequence 1: | NP_001261898.1 | Gene: | pHCl-1 / 39730 | FlyBaseID: | FBgn0264908 | Length: | 978 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285015.1 | Gene: | nAChRalpha3 / 31767 | FlyBaseID: | FBgn0015519 | Length: | 795 | Species: | Drosophila melanogaster |
Alignment Length: | 805 | Identity: | 143/805 - (17%) |
---|---|---|---|
Similarity: | 266/805 - (33%) | Gaps: | 253/805 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 338 KEILDLLLEKKRYDKRLLPPVNDEDFCCGLQSPDMATNQNARRPHNRGTLTVNVNVLLLSLASPD 402
Fly 403 ESSLKYEV---EFLLNQQWNDPRLQYGNKSHYDFLNALH-HHDSIWTPDTYFIMHGDFKDPIIPM 463
Fly 464 HFALRIFRNGTITYAMR---RHLIL---SCQGSLHIFPFDDPKCSFSMESISYE--EAQIKYVWK 520
Fly 521 -NDEDTLRKSPSLT---------TLNAYLIKNQT--TACDQNSWRGNYSCLQVELTFTRDRAYYF 573
Fly 574 TTVFIP--GIILVTSSFITFWL-----EWNAVPARVMIGVTT-----------------MLNFFT 614
Fly 615 TSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGR----KRPLHNVVYRPGENPVT 675
Fly 676 QRL-------------------------PAVLSRIGVILASPLASAAATP--------------- 700
Fly 701 -AMSMMGGATP----MSSGTPAASSSV--ATPGTPRITDPEEFFGGGMRWQEAHGGIIGAAVQNL 758
Fly 759 RARSIKRKAAR-------------------------------SPSTSISPHPSGRPTEHIYEEPG 792
Fly 793 GSTSGVTSTKVKFKDELKEEQPEEAESSTKLRRSVATSTPAL------VVRIEAEIDPEA----- 846
Fly 847 ----------EDKPIQDMEMTERQLSLPLKPPRRKASRS--------NSPASVYSDAFENVEATP 893
Fly 894 GEKRQNAGAPNEIVACTTCGGSNSPCTHSANNGCATETC-----------FV--QVRKKEPPHPI 945
Fly 946 R-----VAKTIDVIARITFPTAYAI 965 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
pHCl-1 | NP_001261898.1 | Neur_chan_LBD | 338..566 | CDD:280998 | 54/251 (22%) |
Neur_chan_memb | 578..>682 | CDD:280999 | 22/156 (14%) | ||
nAChRalpha3 | NP_001285015.1 | Neur_chan_LBD | 26..241 | CDD:280998 | 55/254 (22%) |
Neur_chan_memb | 248..>359 | CDD:280999 | 17/112 (15%) | ||
Neur_chan_memb | <683..760 | CDD:280999 | 15/74 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |