Protein Alignment pHCl-1 and lgc-39

DIOPT Version :9

• Sequence 1: NP_001261898.1
• Gene: pHCl-1 / 39730
• FlyBaseID: FBgn0264908
• Length: 978
• Species: Drosophila melanogaster
• Sequence 2: NP_504821.3
• Gene: lgc-39 / 184265
• WormBaseID: WBGene00017314
• Length: 563
• Species: Caenorhabditis elegans
• Alignment Length: 385
• Identity: 104/385 - (27%)
• Similarity: 180/385 - (46%)
• Gaps: 48/385 - (12%)

  Fly   313 SETGALD---KHPIHGIDWSKFDESSSDKEILDLLLEKKRYDKRLLPPVNDEDFC----CGLQSP 370
            ::||.:.   |:..|..: .|..|:..|:|   .:|:...||    |.....|.|    .|.|:.
 Worm    54 TDTGEVSDQLKYYTHSFE-QKVRETVRDEE---YMLKNLWYD----PEYVIHDLCEPHKSGGQTG 110

  Fly   371 DMATNQNARR--------------------PHNRGTLT-VNVNVLLLSLASPDESSLKYEVEFLL 414
            ::..:::..|                    ..::|..| |:|.|.:.|::|....|:.:||:..|
 Worm   111 ELKWSESGDRLLKVIGNGVVEDGYNMFMAPGQSQGKRTDVHVAVYIESMSSFKAQSMDFEVDMYL 175

  Fly   415 NQQWNDPRLQYGNKSHYDFLNALHHHDSIWTPDTYFI--MHGDFKDPIIPMHFALRIFRNGTITY 477
            ...|.|.||.: |.:|...:.:....|.||.||.||:  .:...::...| :..:.::.:|.|..
 Worm   176 AMGWFDRRLAH-NCTHPILVTSKLIADRIWYPDLYFVNSKYAYLQEVTTP-NLMVIVYPDGLIFK 238

  Fly   478 AMRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKYVWKNDEDT--LRKSPSLTTLNAYLI 540
            .||..:.|||...|.:||.|..:|..:::|.:|.|..:...|::|...  :..:|.: .||...|
 Worm   239 TMRLDVTLSCMMDLKLFPLDYQECPLTIQSFAYIEQIVNLTWRDDPPNFPIGFNPDI-KLNDMQI 302

  Fly   541 KNQ---TTACDQNSWRGN--YSCLQVELTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPA 600
            .|:   ..|.....:||.  :||:|..:...|...::....:||..:||:.|:::|||:..|.||
 Worm   303 TNKRFVKCAGPYPMFRGEAAWSCIQGYIVMKRLVLFHIIQTYIPTGMLVSISWMSFWLDPRASPA 367

  Fly   601 RVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR 660
            |:.:.:|::|...|.|||.|..||.||.:.|:::|.......|:..|||:..|:|...||
 Worm   368 RISLTITSLLTLTTMSNGARQDLPQVSYIKALDIWLTFSQALIFLVLLEYSFVSYYMTKR 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pHCl-1	NP_001261898.1	Neur_chan_LBD	338..566	CDD:280998	63/261 (24%)
		Neur_chan_memb	578..>682	CDD:280999	33/83 (40%)
lgc-39	NP_504821.3	LIC	119..554	CDD:273305	88/312 (28%)
		Neur_chan_LBD	132..336	CDD:280998	54/206 (26%)
		Neur_chan_memb	343..551	CDD:280999	33/85 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D614790at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.020