DRSC/TRiP Functional Genomics Resources

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Protein Alignment pHCl-1 and glc-1

DIOPT Version :9

Sequence 1:NP_001261898.1 Gene:pHCl-1 / 39730 FlyBaseID:FBgn0264908 Length:978 Species:Drosophila melanogaster
Sequence 2:NP_507090.1 Gene:glc-1 / 180086 WormBaseID:WBGene00001591 Length:461 Species:Caenorhabditis elegans


Alignment Length:384 Identity:123/384 - (32%)
Similarity:187/384 - (48%) Gaps:45/384 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 TTASTAAATQSETGALDKHPIH-GIDWSKFDESSSDKEILDLLLEKKRYDKRLLPPVNDEDFCCG 366
            ||..:.|...|        ||| .|:    ...:||.:||..|. ...||.|:.||.:       
 Worm    40 TTLESLARLTS--------PIHIPIE----QPQTSDSKILAHLF-TSGYDFRVRPPTD------- 84

  Fly   367 LQSPDMATNQNARRPHNRGTLTVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRLQYGNK--S 429
                            |.|.:.|:||:||.:::..|..:::|..:..|.:.|.|.||.||.|  .
 Worm    85 ----------------NGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYGVKGDG 133

  Fly   430 HYDFLNALHHHDSIWTPDTYFIMHGD-FKDPIIPMHFALRIFRNGTITYAMRRHLILSCQGSLHI 493
            ..||:.....| .||.|||:|..... :|..|...:..:||..:||:.|::|..|:|||...|..
 Worm   134 QPDFVILTVGH-QIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQY 197

  Fly   494 FPFDDPKCSFSMESISYEEAQIKYVWKNDEDTLRKSPSLTTLNAYLIKN-QTTACDQNSWRGNYS 557
            :|.|..:||..:.|.:|....|:|:||.......|....::|.::.:.| .||.|...:..|.||
 Worm   198 YPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSSSLPSFQLTNTSTTYCTSVTNTGIYS 262

  Fly   558 CLQVELTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRST 622
            ||:..:...|:.::|...::||..:||..|:::||.:..|:||||.:||||:|.....|.|..|.
 Worm   263 CLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGINSQ 327

  Fly   623 LPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKRPLH---NVVYRPGENPVTQRL 678
            ||.||.:.|::||.|.||.||:.:||||..||::..|:.:.   .......|.|:.|.|
 Worm   328 LPPVSYIKAIDVWIGACMTFIFCALLEFALVNHIANKQGVERKARTEREKAEIPLLQNL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pHCl-1NP_001261898.1 Neur_chan_LBD 338..566 CDD:280998 68/231 (29%)
Neur_chan_memb 578..>682 CDD:280999 43/104 (41%)
glc-1NP_507090.1 Neur_chan_LBD 64..273 CDD:280998 68/233 (29%)
LIC 65..452 CDD:273305 113/347 (33%)
Neur_chan_memb 281..451 CDD:280999 43/106 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D614790at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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